3AW5


Conserved Protein Domain Family
CuRO_1_McoP_like

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cd13852: CuRO_1_McoP_like 
Click on image for an interactive view with Cn3D
The first cupredoxin domain of multicopper oxidase McoP and similar proteins
This family includes archaeal and bacterial multicopper oxidases (MCOs), represented by the extremely thermostable McoP from the hyperthermophilic archaeon Pyrobaculum aerophilum. McoP is an efficient metallo-oxidase that catalyzes the oxidation of cuprous and ferrous ions. It is noteworthy that McoP has three-fold higher catalytic efficiency when using nitrous oxide as the electron acceptor than when using dioxygen, the typical oxidizing substrate of MCOs. McoP may function as a novel archaeal nitrous oxide reductase that is probably involved in the denitrification pathway in archaea. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.
Statistics
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PSSM-Id: 259921
Aligned: 20 rows
Threshold Bit Score: 178.251
Created: 22-Aug-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
trinuclear CuDomain 3Domain 2
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: trinuclear Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H H H HClick to see conserved feature residue pattern help
Evidence:
  • Structure:3AW5; trinuclear binding site of Multicopper Oxidase from Pyrobaculum aerophilum.
  • Comment:Trinuclear copper site ligands are typically one or two HxH motifs that can be in the same domain/subunit or in different domains/subunits.
  • Comment:The trinuclear copper binding site of 3-domain MCOs is located at the interface of cupredoxin domains 1 and 3.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                         # #                            
3AW5_A        19 EATYIEATASGYMAEg-----vLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSfaITPGESYNYSFDV 93  Pyrobaculum aer...
CBA29868      88 GKPSPFLLYQTEQSGks----yQNPILRMNSGDKLKLTLRNELTEPTIIHWHGLQTPSKMDGHPAstIDAGKTFDYEFKV 163 Curvibacter put...
CCJ34814      78 RSETPFLWYRTQVNGad----yQNPILLLRTGDELDVTLDNQLDEGTIIHWHGLHVPGREDGHPIhtVDPGDQYEYRFKV 153 Thioalkalivibri...
YP_973532     85 PISSPFLLYQTEHAGka----yQNPILRIESGSRFTASLDNALPEPTIIHWHGLHTPAAMDGHPVntIAPGGRYDYDFTV 160 Polaromonas nap...
NP_840856     69 LKYTGKLLKGPQAAIkql-pgyLGPILNLEQGQRVRIFFYNQLPEPCVTHWHGMHVPQIMDGHPMyaILQGEQYVYEFEV 147 Nitrosomonas eu...
AAU91759      76 LQYAARLVKGPEGTLtnlpgsyLGPLIRLQKGQKVRIHFRNELAEPTIAHWHGMHVPALMDGHPMyaMDPGETFVYEFEV 155 Methylococcus c...
YP_003762037  70 WKFSATLLKGPQGTVeeipgsyLGPILRLRQGQKVRIHFHNKVPGPCVIHQHGLHVPERSDGHPRyaIDQGQTYSYDFQV 149 Candidatus Nitr...
YP_004511093  68 QTYSAKLIKGPRQTLqqlpdnfLGPVLNFQQGQKVRVFFKNNLNEPSIIHWHGLHVPQRSDGHPMysIESGEQFVYEFEV 147 Methylomonas me...
YP_004918204  72 WKVRAKVLKGPASSIenhpdtyLAPTIRLKKGQKVRIHLNNNLPAHSILHWHGLHVPANMDGNPMyaVSHGESYIYEFEI 151 Methylomicrobiu...
CCJ08802      71 WRYVGNLIKGPANALtalpdayLGPLLRFAKGQKIRIRLRNELPEETVTHWHGLHVPMLMDGHPAaaIDPGETYVYEFEI 150 Methylocystis s...
Feature 1                 # #                      
3AW5_A        94 VNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDS 127 Pyrobaculum aerophilum str. IM2
CBA29868     164 LSRGGTYWYHTHAHNLTAKQAYNGLASFFLVDDE 197 Curvibacter putative symbiont of Hydra magnipapillata
CCJ34814     154 TNRGGTYWYHTHAHHRTARQAHQGLASFLLVGDD 187 Thioalkalivibrio sp. DSM 13533
YP_973532    161 RNRGGTYWYHTHAHGLTAKQAYNGLASFFLVDDD 194 Polaromonas naphthalenivorans CJ2
NP_840856    148 KNPAGTNWYHSHTHEMTARQVYQGLTGLITITDE 181 Nitrosomonas europaea ATCC 19718
AAU91759     156 LNRASLNIYHPHPHELTGRQVYYGLAGGILVNDD 189 Methylococcus capsulatus str. Bath
YP_003762037 150 LNRAGTYWYHSHTHQYTGHRVYFGLAGLLLVSDQ 183 Candidatus Nitrosococcus watsonii C-113
YP_004511093 148 MNRAGTSFYHSHSHNLTAEQVYRGLAGLIVVTDS 181 Methylomonas methanica MC09
YP_004918204 152 LNRAGTYWYHAHTHSVTAKQVYSGLAGLFIVHDD 185 Methylomicrobium sp. 20Z
CCJ08802     151 RNRAGMYFYHPHTHEKTATQVYRGLAGAILVEDE 184 Methylocystis sp. SC2

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