3QB4,2BHK,1WAQ


Conserved Protein Domain Family
TGF_beta_GDF5_6_7

?
cd13766: TGF_beta_GDF5_6_7 
Click on image for an interactive view with Cn3D
transforming growth factor beta (TGF-beta) like domain found in growth/differentiation factor 5 (GDF5), factor 6 (GDF6), factor 7 (GDF7) and similar proteins
The family includes GDF5, GDF6 and GDF7. GDF5, also termed bone morphogenetic protein 14 (BMP-14), or cartilage-derived morphogenetic protein 1 (CDMP-1), or lipopolysaccharide-associated protein 4 (LAP-4), or LPS-associated protein 4, or radotermin, is a growth factor involved in bone and cartilage formation. GDF6, also termed bone morphogenetic protein 13 (BMP-13), or growth/differentiation factor 16, is a growth factor that controls proliferation and cellular differentiation in the retina and bone formation. GDF7, also termed bone morphogenetic protein 12 (BMP-12), may play an active role in the motor area of the primate neocortex.
Statistics
?
PSSM-Id: 381644
Aligned: 22 rows
Threshold Bit Score: 192.264
Created: 16-Apr-2010
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
homodimer
Conserved site includes 45 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:3QB4; Homo sapiens GDF5/BMPR1A complex forms a homodimer, contacts at 4A.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1             ###   ####  #      # ### #    ######   ### ### ## ## #  ##  # ##  #    #   
3QB4_A        16 CSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLASHLepTNHAVIQTLMNSMDPesTPPTCCVPTRLSPISILFI 95  human
Q7Z4P5       349 CSRKPLHVDFKELGWDDWIIAPLDYEAYHCEGLCDFPLRSHLepTNHAIIQTLLNSMAPdaAPASCCVPARLSPISILYI 428 human
XP_019736285 305 CRRVRLHVDFRALGWDDWIIAPLDYQAFRCDGSCDFPLRSHLqpTNHAVVQTLLHAMAPpaAPPACCVPTRLGAISVLYV 384 tiger tail seah...
AAS77520     333 CRRKRMYVDFRLLGWSDWIIAPQGYDAYLCEGECKYPIDNYLrpTNHATVQTIVNSLDPsiAPKACCTPNELSPISILYT 412 starlet sea ane...
XP_002602867   1 CMRRSLQVSFHDLGWDDWIIAPTNYDAHYCAGACSFPLRSHLepTNHAIVQTLVNSMNPraVEKVCCVPTKLSPISILYI 80  Florida lancelet
XP_005942191 291 CSRKPLHVNFRDLGWDDWIIAPLDYEARRCDGVCDFPLRAHLepTNHAVIQTLMNSMDPdlSPPSCCIPSSLSPISILYM 370 Burton's mouthb...
NP_989669    399 CSRKALHVNFKDMGWDDWIIAPLEYEAYHCEGLCEFPLRSHLepTNHAVIQTLMNSMDPesTPPTCCVPTRLSPISILFI 478 chicken
NP_001086466 393 CSKKPLHVNFKDMGWDDWIIAPLEYEAYHCEGLCEFPLRSHLepTNHAVIQTLMNSMDPetTPPTCCVPTRLSPISILYT 472 African clawed ...
P43026       400 CSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLepTNHAVIQTLMNSMDPesTPPTCCVPTRLSPISILFI 479 human
XP_006007743 226 CSRKALHVNFKDMGWDDWIIAPLEYEAYHCEGLCEFPLRSHLepTNHAVIQTLMNSMDPesTPPTCCVPTRLSPISILYI 305 coelacanth
Feature 1        #        # #### #     #
3QB4_A        96 DSa-NNVVYKQYEDMVVESCGCR 117 human
Q7Z4P5       429 DAa-NNVVYKQYEDMVVEACGCR 450 human
XP_019736285 385 DVh-DNVVYRQYRNMVVDACGCR 406 tiger tail seahorse
AAS77520     413 EDgsNNVVYKNYKDMVVERCGCS 435 starlet sea anemone
XP_002602867  81 DGk-DTVVYKKYDDMVADQCGCR 102 Florida lancelet
XP_005942191 371 DSa-GSVVYKQYENMVVESCGCR 392 Burton's mouthbrooder
NP_989669    479 DSa-NNVVYKQYEDMVVESCGCR 500 chicken
NP_001086466 473 DSa-NNVVYKQYEDMVVESCGCR 494 African clawed frog
P43026       480 DSa-NNVVYKQYEDMVVESCGCR 501 human
XP_006007743 306 DSa-NNVVYKQYEDMVVESCGCR 327 coelacanth

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap