Conserved Protein Domain Family
SPRY_PRY_TRIM1

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cd13739: SPRY_PRY_TRIM1 
PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM1 (also known as MID2 or midline 2). MID2 and its close homolog, TRIM18 (also known as MID1), both contain a B30.2-like domain at their C-terminus and a single fibronectin type III (FN3) motif between it and their N-terminal RBCC domain. MID2 and MID1 coiled-coil motifs mediate both homo- and heterodimerization, a prerequisite for association of the rapamycin-sensitive PP2A regulatory subunit Alpha 4 with microtubules. Mutations in MID1 have shown to cause Opitz syndrome, a disorder causing congenital anomalies such as cleft lip and palate as well as heart defects.
Statistics
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PSSM-Id: 293974
Aligned: 5 rows
Threshold Bit Score: 362.022
Created: 31-Oct-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9QUS6       506 FKLDPKMTHkkLKISNDglQMEKDESSLKKSHTPERFSGTGcYGAAGNIFIDsGCHYWEVVMGsSTWYAIGIAYKSAPKN 585 house mouse
Q9UJV3       536 FKLDPKMTHkkLKISNDglQMEKDESSLKKSHTPERFSGTGcYGAAGNIFIDsGCHYWEVVMGsSTWYAIGIAYKSAPKN 615 human
NP_001177813 486 FKLDPKYAHkkLKISNDgmQMEKEESSLKKSHTPERFSGTGcYGATGNIFIDsGCHYWEVAVGnSTWYAIGIAYKSAPRN 565 African clawed ...
XP_420134    488 FKLDPKMAHkkLKISNDglQMEKDESSLKKSHTPERFSGTGcYGAAGNVFIDsGCHYWEVVVGsSTWYAIGVAYKSAPKN 567 chicken
CDQ96957      51 FKLDPKTAHkkLRLSNDclTMEKDESSLKKSHTPERFSSTGsYGAAGSVFMDsGCHYWEVLLGaSTWYAVGVAYKSAPKN 130 rainbow trout
Q9QUS6       586 EWIGKNASSWVFSRCNSNFVVRHNNKEMLVDVPPqlKRLGVLLDYDNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWN 665 house mouse
Q9UJV3       616 EWIGKNASSWVFSRCNSNFVVRHNNKEMLVDVPPhlKRLGVLLDYDNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWN 695 human
NP_001177813 566 EWVGKNTSSWVFSRCNNNFLVRHNNKEALLDVNPqlKRLGVLLDYDNNTFSFYDPANSLHLHTFQISFILPVCPTFTIWN 645 African clawed ...
XP_420134    568 EWIGKNSSSWVFSRCNNNFVVRHNNKEMLVEVHPqmKRLGVLLDYDNNALSFYDPANSLHLHTFEVSFILPVCPTFTIWN 647 chicken
CDQ96957     131 EWSGKNSSSWVLSRCNNNFMVRHNGKEMLVEASHqlRRLGVLLDYDNNSLSFYDAMNSQHLHTFEVSFLLPVAPTFMIWN 210 rainbow trout
Q9QUS6       666 KSLMILSGLP 675 house mouse
Q9UJV3       696 KSLMILSGLP 705 human
NP_001177813 646 KSMLILSGLP 655 African clawed frog
XP_420134    648 KSLMILSGLP 657 chicken
CDQ96957     211 KSVMILSGLP 220 rainbow trout
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