1ZIU,1NL5,1MDP,1Y4C,1SVX,1EZ9,2NVU,1NMU,1N3W,1IUD,1FQA,2OBG,2V93,1EZP,1T0K,2OK2,1MDQ,3CSG,1MPB,3N93,3JYR,3PUZ,3PUY,3W15,4GLI


Conserved Protein Domain Family
PBP2_MBP

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cd13656: PBP2_MBP 
Click on image for an interactive view with Cn3D
The periplasmic binding component of ABC tansport system specific for maltose; possess the type 2 periplasmic binidng fold.
This group includes the periplasmic maltose-binding protein of an ATP-binding cassette transporter. Maltose is a disaccharide formed from two units of glucose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.
Statistics
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PSSM-Id: 270374
Aligned: 27 rows
Threshold Bit Score: 648.887
Created: 20-Aug-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
chemical
Conserved site includes 15 residues -Click on image for an interactive view with Cn3D
Feature 1:chemical substrate binding site [chemical binding site]
Evidence:
  • Structure:1NL5; Escherichia coli maltose-binding protein binds maltose, contacts at 4A.
  • Structure:1EZ9; Escherichia coli maltodextrin binding protein in complex with alpha-D-glucose, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            # ##                                              #  ##                  
1ZIU_A      5 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWhHDHFGGYAQSGLLAEitpdka 84  Escherichia coli
1NL5_A      5 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEitpdka 84  Escherichia coli
1SVX_B     20 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEitpdka 99  Escherichia coli
2NVU_B      9 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEitpdka 88  human
1N3W_A      5 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEitpdka 84  Escherichia coli
2OK2_A      5 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEitpdka 84  Escherichia coli
1MDQ_A      5 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEitpdka 84  Escherichia coli
3N93_A      7 GKLVIWINGDKGYNGLAEVGKKFEKdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEitpdka 86  human
3JYR_A     31 GKLVIWINGDKGYNGLAEVGKKFEQdtGIKVTVEHPDkleEKFPQVAATGdGPDIIFWaHDRFGGYAQSGLLAEvtpdka 110 Salmonella enteric...
ADE54094   27 GELLVWINGDKGYRGLAEIGKLFEEelGIPVKVEAPEgatDKFQQAAQSGkGPDIFFWpHDRLGEWASAGLLSPievrks 106 Coraliomargarita a...
Feature 1                               #                                          ####       
1ZIU_A     85 fqdklypftwdAVRYNGKLIAYPIAVMALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPEFTWPLIAA 163 Escherichia coli
1NL5_A     85 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPYFTWPLIAA 163 Escherichia coli
1SVX_B    100 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPYFTWPLIAA 178 Escherichia coli
2NVU_B     89 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPYFTWPLIAA 167 human
1N3W_A     85 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPYFTWPLIAA 163 Escherichia coli
2OK2_A     85 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPYFTWPLIAA 163 Escherichia coli
1MDQ_A     85 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPYFTWPLIAA 163 Escherichia coli
3N93_A     87 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLLpnPPKTWeEIPALDKElkak-gksALMFNlqEPYFTWPLIAA 165 human
3JYR_A    111 fqdklypftwdAVRYNGKLIAYPIAVEALSLIYNKDLVpnPPKTWeEIPALDKElkvk-gksAIMFNlqEPYFTWPLIAA 189 Salmonella enteric...
ADE54094  107 fkqqysnkgweAFTHNGELWGYPVSLEAVGLIYNKAQVttPPAQLkDIPALHKQvqakhnssAILWDyqNTYFTWGVLAS 186 Coraliomargarita a...
Feature 1                                                                        #            
1ZIU_A    164 DGGYAFKYENGkyd-ikDVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 242 Escherichia coli
1NL5_A    164 DGGYAFKYGDIk-----DVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 238 Escherichia coli
1SVX_B    179 DGGYAFKYENGkyd-ikDVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 257 Escherichia coli
2NVU_B    168 DGGYAFKYENGkyd-ikDVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 246 human
1N3W_A    164 DGGYAFKYGDIk-----DVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 238 Escherichia coli
2OK2_A    164 DGGYAFKYENGkyd-ikDVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 242 Escherichia coli
1MDQ_A    164 DGGYAFKYENGkyd-ikDVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 242 Escherichia coli
3N93_A    166 DGGYAFKYENGkyd-ikDVGVDNaGAKAGLTFLVDLiknkHMNADTdysIAEAAFNKGetaMTINGPWawsnidtskvnY 244 human
3JYR_A    190 DGGYAFKFENGkyd-vkDVGVDNaGAKAGLTFLIDMiknkNMSADTdysIAEAAFNKGetaMTINGPWawsnidkskvnY 268 Salmonella enteric...
ADE54094  187 GGGYVFGTDDSgnytpsDVGVATeGSIQALQGIVDLidsgVMPRGAsysVMEARMNQGevaMMISGPWawanlrksgidF 266 Coraliomargarita a...
Feature 1                                                                                     
1ZIU_A    243 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGAVALKSYEEELak-dPRIAATM 321 Escherichia coli
1NL5_A    239 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGAVALKSYEEELak-dPRIAATA 317 Escherichia coli
1SVX_B    258 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGAVALKSYEEELak-dPRIAATM 336 Escherichia coli
2NVU_B    247 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGAVALKSYEEELak-dPRIAATM 325 human
1N3W_A    239 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGAVALKSYEEELak-dPRIAATM 317 Escherichia coli
2OK2_A    243 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGAVALKSYEEELak-dPRIAATM 321 Escherichia coli
1MDQ_A    243 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGGSVALKSYEEElakdPRIAATM 322 Escherichia coli
3N93_A    245 GVTVLPtfkgqpskPFVGVLSAGINAasPNKELAKEFLENYlltDEGLEAVNKdkplGAVALKSYEEELak-dPRIAATM 323 human
3JYR_A    269 GVTLLPtfkgkpskPFVGVLSAGINAasPNKELAKEFLENYlltDQGLEAVNKdkplGAVALKSFQEQLak-dPRIAATM 347 Salmonella enteric...
ADE54094  267 GVAPVPgidgnpgrPFVGVLGAMLNRasPNKELAVEFLENYvltDEGLATIDKdvplGVPAKTSFYEALasdnELIAATQ 346 Coraliomargarita a...
Feature 1             #         #   #                        
1ZIU_A    322 ENaqkGEIMPNIPQMSAFEYAVRTAVInaasGRQTVDEALKDAQTRI 368 Escherichia coli
1NL5_A    318 ENaakGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDEALKDAQTRI 364 Escherichia coli
1SVX_B    337 ENaqkGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDEALKDAQTGS 383 Escherichia coli
2NVU_B    326 ENaqkGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDAALAAAQTNA 372 human
1N3W_A    318 ENaqkGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDEALKDAQTRI 364 Escherichia coli
2OK2_A    322 ENaqkGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDEALKDAQTHM 368 Escherichia coli
1MDQ_A    323 ENaqkGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDEALKDAQTRI 369 Escherichia coli
3N93_A    324 ENaqkGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDEALKDAQTNA 370 human
3JYR_A    348 DNaqkGEIMPNIPQMSAFWYAVRTAVInaasGRQTVDAALKDAQSRI 394 Salmonella enterica subsp. enterica serovar Typhimu...
ADE54094  347 QNienGVIMPNVPEMGRFWSSMAAALQiatnGQAPADQALKDAASNM 393 Coraliomargarita akajimensis DSM 45221

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