2X7P


Conserved Protein Domain Family
PBP2_Ca3427_like

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cd13637: PBP2_Ca3427_like 
Click on image for an interactive view with Cn3D
The conserved hypothetical protein Ca3427 exhibits the type 2 periplasmic-binding protein fold
This group includes the Ca3427 protein from candida albicans, which is an ortholog of Ttha1568 (MqnD) from Thermus thermophilies HB8, and other related hypothetical proteins. MqnD is an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. Ca3427 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.
Statistics
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PSSM-Id: 270355
Aligned: 40 rows
Threshold Bit Score: 356.879
Created: 29-Feb-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative ligand
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:putative ligand binding site [chemical binding site]
Evidence:
  • Comment:2X7P; the conserved Candida Albicans Ca3427 gene product binds polyethylene glycol, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           # ###                            #                                        
2X7P_A     16 TLKVAYIPEHFsTPLFFAQqqgyykahdlSIEFVKvpegSGRLINLLNSnevDIAIGLTEAFIAdiakgneNIHVLDtYV 95  Candida albicans
EDP94464    3 KINIGGVPEHFnLAWYLTLkersyekkgiNLRWKDypggTGAMCKALRNkkiDLAVILTEGIIKdii-agnPAKIVQtYV 81  Kordia algicida OT-1
EAP86552    3 KLRIGGVPEHFnLPWHLCLdndefsevglDITWRDfyggTGQMSKALRDneiDVAIMLTEGIVKdii-dgnPSKIIQkYI 81  Croceibacter atlan...
EAQ41211    3 NLKVGGVPEHFnYPWYLTLknkeytehniNLRWQDypggTGQMCKALREgtvDIAIVLTEGIIKdis-ngnPSKIVQtFV 81  Polaribacter dokdo...
CAL66595    3 TIKVGGVPEHFnLPWHRCIendkfkkediNVVWKEfpegTGAMCKALRSgeiDVAVILTEGVIRdii-ngnKSKIIQtYI 81  Gramella forsetii ...
EHQ01228    3 TLRIGGVPEHFnLPWHLCMeegdfsyehlTVTWRDfpdgTGAMNKALRNneiDVAIILTEGIIKdih-dgnPSKIIQtYV 81  Gillisia limnaea D...
EAQ50597    3 TLRVGGVPEHFnLPIHLCIeeglfaekgiHVEWVEfpggTGAMNSALRNdeiDVAIILTEGIIKdia-ngnPSKIIQnYV 81  Leeuwenhoekiella b...
ADF53024    3 TLKVGGVPEHFnLPWHLCIendefknqdiNVIWKDfpdgTGAMTRALRNgeiDVAVLLTEGAVKdii-sgnEARIVQsYI 81  Zunongwangia profu...
CCB69701    3 KVKIAGVPEHFnFPWQKSIsegqfeqhqiDLEWTSvpegTGKLCEMLRHnetDIAIILTEGIIKdii-agnCSKIVQiYV 81  Flavobacterium bra...
EAR15580    4 MARIAGVPEHFnLPWHLALqdgafarqgiHLEWTDvpqgTGRMCAMLEAgetDLALILTEGFVKaas-gglDAVIVQeYV 82  Robiginitalea bifo...
Feature 1                                                                                     
2X7P_A     96 KSPllWAVSTGsnrddvt-dakqlkRIGVSRiGSGSYVXSFVLAhqlg-vpsfDQFQVLSNFkNLRDSVNLkdgvegSDA 173 Candida albicans
EDP94464   82 KSPliWGIHVAadasyntiedlegtKAAISRyGSGSHLMAYINAenndwdtdkLNFEVINNLeGAIDGLNKg----kGDY 157 Kordia algicida OT-1
EAP86552   82 ASPliWGIHVAqdskyttiadlkdtTCAISRfGSGSHLLAYVNAqnmdwdtseLKFEVVKNLdGALEALPEd----kAQY 157 Croceibacter atlan...
EAQ41211   82 KSPlvWGIHVGakskfktiadlehaTIAISRyGSGSHLMAIVNAynqgwdvskLKFKVIKNLeGGIEALTNg----eADY 157 Polaribacter dokdo...
CAL66595   82 ASPliWGIHVNagspyrdiqdlkntKAAISRmGSGSHLMAYVNAehmdwntdeLQFEIINNLdGAIDALKKd----dAQY 157 Gramella forsetii ...
EHQ01228   82 ESPliWGVHVSdgskytslaelehtKAAISRpGSGSQLMAYVNAknqgwdlskLEFEVVGTIeDAVKALKFd----tAQY 157 Gillisia limnaea D...
EAQ50597   82 SSPlrWGIHVAaksnfqsiadledkRPAISRyGSGSHVMAYVQAnelgwdtskIECVVVNNItTAIEALTEr----eADY 157 Leeuwenhoekiella b...
ADF53024   82 ASSliWGIHVDagsdyqsiedlagkKVAISRvGSGSQLMAYVNAqnqawdpskLEFEIVGDInGAVKALKEg----rADY 157 Zunongwangia profu...
CCB69701   82 DSPllWGIHVSasskfqtisdlyqtRAAISRkGSGSELMTYVHAkeqhwpidtLQFEIVHTIdGAVKALIEe----kADY 157 Flavobacterium bra...
EAR15580   83 GSPlqWGIHVGsksdfqevgelqngRAAISRyGSGSHLMAYVLAgnmgwdtqsMGFEVVDTLdGAVSALSAg----eADY 158 Robiginitalea bifo...
Feature 1        #  #                      #                                                  
2X7P_A    174 FXWEYFTSKKYydNHEIKQIDQIYTPWSSWVVATSSdslqaksdviKNFIDAVNQGIQYYNehvdeaiEYISSnldysaE 253 Candida albicans
EDP94464  158 FMWEHFTTKPLvdQGIFKRVADCPTPWPCFVIAVRSelleedeetvKTILEIINEMTAQFKdip-nidEEIATryeqqlE 236 Kordia algicida OT-1
EAP86552  158 FMWEHFTTKPYvdNGTFRRVGDCPTPWPCFVIVARDeviknntkdlEALLDVINRTSKEFKsip-misKTLSNayeqdeK 236 Croceibacter atlan...
EAQ41211  158 FMWEHFTTKPLvdEGVFRRIDDCPTPWPCFVIAVRDeilennfeevQKVLKIINAKTSNFKaip-nidKTLAKrykqklE 236 Polaribacter dokdo...
CAL66595  158 FMWEHFTTKPLvdNKTFRLIADCPTPWPCFVIAASEesietepealQKMLGVLNSETENFKlqk-nieVELSErydqklE 236 Gramella forsetii ...
EHQ01228  158 FMWEHFTTKPFvdRGIFKRVADCPTPWPCFMMAATNeiirnnprelKKMLDVINAKTTSFKeip-diaELLATrydqkiR 236 Gillisia limnaea D...
EAQ50597  158 FMWEHFTTKPLvdKGIFRRVGDFPTPWSSFVIAASDkaiekdqkslELFLSVLNAKTKIFKsle-hieHALSEryeqnlE 236 Leeuwenhoekiella b...
ADF53024  158 FMWEHFTTKPLvdNGTFRRVVDCPTPWPCFVIAVKNeilkidyadvRKMIDIVNQKSSEILnip-gidKVFAErygqkiE 236 Zunongwangia profu...
CCB69701  158 FMWEHYMTKPLvdNGIFRRLGDCPTPWPSFVIAVTDnfleknteiiKIILNIINDVTSKFKlip-nidQIIAEkfslqqA 236 Flavobacterium bra...
EAR15580  159 FMWERFTTQALvdSDVFRRVGVCPTPWPCFVLVARGeyarskpgvlQTLLQVINSYTSRFKaip-didQTLALrydqklE 237 Robiginitalea bifo...
Feature 1                                              
2X7P_A    254 DAKEWTKtvefnsrigktplDWDTIVVKTKDTLKlAGVLAE 294 Candida albicans
EDP94464  237 DVQKWLSltew-----sqeiIDEKTIHKVQDKLLsLEIIPE 272 Kordia algicida OT-1
EAP86552  237 DIKEWLGltrw-----sqeqLSETTITNVQDKLLeLELISE 272 Croceibacter atlanticus HTCC2559
EAQ41211  237 DIQKWLKithwn----sqkpITKNLITRIQNKMItFNVIEK 273 Polaribacter dokdonensis MED152
CAL66595  237 DIRKWLDltsw-----sqeqISDKNVEKVMDKLKtLNLIDS 272 Gramella forsetii KT0803
EHQ01228  237 DIKAWMDvtaw-----sqyeFTKEEMEKTQNSLLdLNLISK 272 Gillisia limnaea DSM 15749
EAQ50597  237 DIKKWLSitsw-----sqksLDKKELELALNYLEkLNMIDK 272 Leeuwenhoekiella blandensis MED217
ADF53024  237 DIRKWMEitsw-----sqqqISEADLEEVQQQLLrLDLISN 272 Zunongwangia profunda SM-A87
CCB69701  237 DVAEWLKitnw-----sdkqIAPEMLNSIQNQLVaLHIINK 272 Flavobacterium branchiophilum FL-15
EAR15580  238 DIRSWLKitew-----sqqqVEVHVLDNVINTLFeLNLLSN 273 Robiginitalea biformata HTCC2501

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