1NH7,1NH8


Conserved Protein Domain Family
PBP2_HisGL1

?
cd13591: PBP2_HisGL1 
Click on image for an interactive view with Cn3D
The catalytic domain of hexameric long form HisGL1; contains the type 2 periplasmic binding protein fold
Encoded by the hisG gene, the ATP phosphoribosyltransferase (ATP-PRT, EC 2.4.2.17) is the first enzyme in histidine biosynthetic pathway that catalyzes the condensation of ATP and PRPP (5'-phosphoribosyl 1'-pyrophosphate), and is regulated by a feedback inhibition from the product histidine. ATP-PRT has two distinct forms: a hexameric long form, HisGL, containing two catalytic domains and a C-terminal regulatory domain; and a hetero-octomeric short form, HisGs, without the regulatory domain. HisGL is catalytically competent, but the hetero-octameric HisGs requires the second subunit HisZ, a paralog to the catalytic domain of functional histidyl-tRNA synthetases (HisRSs), for the enzyme activity. This catalytic domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.
Statistics
?
PSSM-Id: 270309
Aligned: 8 rows
Threshold Bit Score: 283.509
Created: 21-Apr-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
chemical
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:chemical substrate binding site [chemical binding site]
Evidence:
  • Structure:1NH8; Mycobacterium tuberculosis HisG catalytic domain in complex with adenosine monophosphate (AMP), contacts at 4A.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                  #                                                                     
1NH7_A        21 MLRVAVPNkGALSEPATEILAEAGYrrrtdsKDLTVIDpvnNVEFFFlrpkDIAIYVGSGelDFGITGRDLVCDSgaqVR 100 Mycobacterium t...
1NH8_A        21 MLRVAVPNkGALSEPATEILAEAGYrrrtdsKDLTVIDpvnNVEFFFlrpkDIAIYVGSGelDFGITGRDLVCDSgaqVR 100 Mycobacterium t...
ABV96516       4 TLRIAMPNkGSLAPGSRQLLTAAGFdlcgvgPRLFYTDqdnDAEILSlrarDIPEMIAQGyvDAGITGRDLVADSgheLS 83  Salinispora are...
YP_444865      1 MLQIALPNkGALADGAVTLADEAGYncrrrgRELSVRDpdyGVEFVFlrprDIATYVSKGiiDLGVTGLDLTYDSgadVT 80  Salinibacter ru...
YP_004314994   1 MIRMALPNkGSLYQPCIDLLVSCGYsvkkptKGLYFYDeknEIEFYFlranDIPMYLSKGiiDIGITGKDFHSEKksnAV 80  Marinomonas med...
A1R5S0         1 MLRVAVPNkGSLSEAASAMLSEAGYrqrrdtRELVMVDpdnDIEFFFlrprDIAVYVGQGtlDVGITGRDLLLDAkveAE 80  Arthrobacter ni...
Q827L7         1 MLRIAVPNkGSLSGPAAEMLHEAGYqqrresKELRIVDpenEVEFFYlrprDIAIYVSSGrlDIGLTGRDLLIDSganAE 80  Streptomyces av...
A4X642         1 MLRVAVPNkGTLAEKAAQMLREAGYrqrtdpKDLVCRDdanNIEFFYlrpkDIATYVGSGdlDVGITGRDLLVDSgapAT 80  Salinispora tro...
Feature 1                                            #                                      #####
1NH7_A       101 ERLALGFGSSSFRYAAPagrnwt-tadlagMRIATAYPNLVRKDLAtkgIEATVIRLDGAVEISVQLGVaDAIADVVGSG 179 Mycobacterium t...
1NH8_A       101 ERLALGFGSSSFRYAAPagrnwt-tadlagMRIATAYPNLVRKDLAtkgIEATVIRLDGAVEISVQLGVaDAIADVVGSG 179 Mycobacterium t...
ABV96516      84 EMLTLGFGRSTVRVAAPhghvdn-vralhgKRVATTLPSLTARHLAglgVRATVVAMTGAVEGAVHLGVaEAVVDVVESG 162 Salinispora are...
YP_444865     81 HVLDLGFGAARFCYAAPkssdltpdaftadTRIATSYDTLVRRDLEqrgVDARVISLDGAVEISIQLGVaDVIADVVQTG 160 Salinibacter ru...
YP_004314994  81 NLLDLPFGHSKLCIAAMqsstlnnkddisgLRVATSFPNIVGDYFQd--NDIEIVELDGAVEISVSLGLaDCVVDIVETG 158 Marinomonas med...
A1R5S0        81 ELLPLGFAPSTFRFAGPvgdfsg-veqlegKRLATSYDGLLRDYLAergVNAKVVRLDGAVESSVRLGVaDAIADVVETG 159 Arthrobacter ni...
Q827L7        81 EILPLGFARSTFRFAGKpgtakg-iedlagLTVATSYEGIVAKHLAdsgIDASVVHLDGAVETAIELGVaEVIADVVETG 159 Streptomyces av...
A4X642        81 EVVDLGFGQATFRFAARpedidt-aqdldgRRVATAYPGLVERHLAelgVKADVIRLDGAVENAIRLGLaDVVADVVETG 159 Salinispora tro...
Feature 1        ##                                               
1NH7_A       180 RTLSQHDLVAFGEPlCDSEAVLIERAgtd--gqdQTEARDQLVARVQGV 226 Mycobacterium tuberculosis
1NH8_A       180 RTLSQHDLVAFGEPlCDSEAVLIERAgtd--gqdQTEARDQLVARVQGV 226 Mycobacterium tuberculosis H37Rv
ABV96516     163 RTMAAHDLRVIGAP-LVISEAVLVALpa----atGAPELRRLAERLGKV 206 Salinispora arenicola CNS-205
YP_444865    161 RTIDEAGLATIGAPiLNTEAVLVAQNgh----tmEKDAAQHFAERVKGI 205 Salinibacter ruber DSM 13855
YP_004314994 159 STLKSAGLRVVSEPiFTSNASLYSAPnp-----tNKPDQNKIVNRITGR 202 Marinomonas mediterranea MMB-1
A1R5S0       160 NTLKAAGMEIFGDPiLKSEAVLIRRSgsggaangTAKEIEILIRRLQGV 208 Arthrobacter nitroguajacolicus Rue61a
Q827L7       160 TSLRNAGLEVFGEPiMKSEAVVIRRVgagt-deaAESKVQQFLRRLQGV 207 Streptomyces avermitilis MA-4680
A4X642       160 ATLRQAGLVVFGEPlLRSSAVLVCRSaa-----qPHPQGELLLRRLHSV 203 Salinispora tropica CNB-440

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap