1PC3,2Z22,1IXH,2ABH


Conserved Protein Domain Family
PBP2_PstS

?
cd13565: PBP2_PstS 
Click on image for an interactive view with Cn3D
Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily.
This subfamily contians phosphate binding domain found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.
Statistics
?
PSSM-Id: 270283
Aligned: 58 rows
Threshold Bit Score: 168.949
Created: 19-Aug-2009
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
chemical
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:chemical substrate binding site [chemical binding site]
Evidence:
  • Structure:1IXH; Escherichia coli phosphate-binding protein (Pbp) complexed with phosphate, contacts at 4A.
  • Citation:PMID 9228942
  • Structure:1PC3; Mycobacterium tuberculosis ABC phosphate transport receptor complexed with phosphate, contacts at 4A.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                ###                               ##                        #           
1PC3_A        26 PVTLAETGSTLlyPLFNLWGPAFHEry-----pnVTITAQGtGSGAGIAQAAAGTv-------NIGASDaYLSEGDMaah 93  Mycobacterium t...
1IXH_A         1 EASLTGAGATFpaPVYAKWADTYQKet------gNKVNYQGiGSSGGVKQIIANTv-------DFGASDaPLSDEKLaq- 66  Escherichia coli
P47652        27 INLISAVGSSSvqPLLNKLSSYYVLnenndndklVEISVQAgGSNAGIRAIINGFa-------DIGNVSkNPKEYAKene 99  Mycoplasma geni...
P35482        21 AMAVTGGGASLpaELYKGSADSILPa-------nFSYAVTGsGTGKNAFLTNNSSlfgttgtvHYAGSDsVLSGSELtty 93  Pseudomonas aer...
CAL53520      32 RFQLHGSGTTNpsKLFWWAMDLLEErsk----sdVRMTYRSvGSGVGENDITDNFad----taDFASTDyGLAPGASgk- 102 Ostreococcus tauri
EES52209      27 AEELLLSGSSMltPLEESWVTAYVReh-----pgRAVEVLAtGSGIGVRSATGGRa-------TIGASDiPLDSRRKrqe 94  Leptospirillum ...
EAY58047      34 AEGMTIDGSTMlsPLEKRWAREYAHgh------lQTIRIQAdGSGAGIDRVGSGNv-------EIGSSDvFLSGRLRkkf 100 Leptospirillum ...
YP_001406008  16 KADIKGAGATFvyKAVKELAIDYKDkf------gKKVDFTPiGSSGGIKELKRGDv-------NFAISE-IKGNCEN--- 78  Campylobacter h...
EAY58276      40 ASNITISGSTMlfPLEQVWALAYMKqh-----pgVHISVAStGSGFGIANAANGNi-------TVGASDaYLTKEFRqry 107 Leptospirillum ...
YP_002220040  37 TISLLETGSTLlyPLFNLWVPVYTKmn-----pgIQITTQGtGSGTGIAEAISGVa-------QIGASDaYMSDAQIkqh 104 Acidithiobacill...
Feature 1                                                                                        
1PC3_A        94 --------kgLMNIALAiSAQQVNYNLPGvsehlkl--ngkvlaAMYQGTIKTWDDPqiaaln----pgvnlPGTAVVPL 159 Mycobacterium t...
1IXH_A        67 --------egLFQFPTViGGVVLAVNIPGlksgelv-ldgktlgDIYLGKIKKWDDEaiakln----pglklPSQNIAVV 133 Escherichia coli
P47652       100 kk---wrdkkLKTLTIGkDAIAVIYKAPQelkgkll-ltkdninDLYDLFAGVKTINidkfvkkdtknmsneKDYPLTSF 175 Mycoplasma geni...
P35482        94 nsnyngtygpLIQIPSVaTSVTVPYRKDGnttlnl---tsaqlcDAFSGAKTTWGQLlg-----------ttDSTPIRIV 159 Pseudomonas aer...
CAL53520     103 ---------eIYQIPFQiGGVSLFHNVPGiatgalk-lsactiiKIYKGEITTWNHGdiqadn----pdltlPAEKIKLV 168 Ostreococcus tauri
EES52209      95 --------ggIVPIPVAlSGVVVAANLPSlpqtatlrldgpllaRLFSGKIRFWDDPalvaln----pgltlPHLPVRPI 162 Leptospirillum ...
EAY58047     101 --------pkLVAIPVAlSGVVIFYNLPEkpglrln-msgdvlaRIFLGKIRYWDDAalqsln----pgirlPHRKIIPV 167 Leptospirillum ...
YP_001406008  79 ----------CEFSQFAkGNVAVIYNVKDvkylnl---ngkilaEIYLGKIEFWDDEkikiln----qdenlPHEKINIF 141 Campylobacter h...
EAY58276     108 --------anLVSVPIAfDDAQVIYNIPGldkktvlnfdgkvlaRIYLGKIRFWNDRqiraln----psvslPHTRIRVV 175 Leptospirillum ...
YP_002220040 105 --------pnILNIPLAiSIQMINYNVPGlnnvhlk-lsgpvlaGIYSGKITNWDDAaiakln----pgiklPNHKIIPV 171 Acidithiobacill...
Feature 1         #      ###                                                                     
1PC3_A       160 HRSD---GSGDTFLFTQYLskqdpegwgksp-----------gfgttvdfpavPGALGEn---GNGGMVTGCAETpGCVA 222 Mycobacterium t...
1IXH_A       134 RRAD---GSGTSFVFTSYLakvneewknn---------------vgtgstvkwPIGLGGk---GNDGIAAFVQRLpGAIG 192 Escherichia coli
P47652       176 PRTGgsfASGTAEAFLNFSalksdktldsqtrd-------ilkgiinygplakPTSETNie-aFNTFVTNLQDPNlFGMI 247 Mycoplasma geni...
P35482       160 YRTG---SSGTTELFTRHLnsicptrfatnst---------ftnarlpaggtlPSNWVGv--aATSTVVSTVKATnGSLG 225 Pseudomonas aer...
CAL53520     169 YRSN---GSSSTHGVKGYMnevsttacptgwpapysassfpstttvqahssvyDVAYAVt---GSDTMRIKIGETpYSLG 242 Ostreococcus tauri
EES52209     163 HRSD---RSGTTFLFTSYLthtsvlwres---------------fgvedrpswPRGSVGv--sGSAALRAALLKTpGAVG 222 Leptospirillum ...
EAY58047     168 HRKD---ASGSTYVLTEYLsrtsrswsdt---------------egrdkkfpvLPGPGAi---GSQALITEVSRTpGSLG 226 Leptospirillum ...
YP_001406008 142 HRYD---GSGTTLAFSEFLsandkkfaei---------------lgsgfslnfKVGIGKk---GSYIIAQSVRDTpFSIG 200 Campylobacter h...
EAY58276     176 HRAD---ASGTTFVFTDYLnqtsqewynq---------------vgrdmspawPVGSGYn---GSDAVVAAVMSSpGSIG 234 Leptospirillum ...
YP_002220040 172 HRTD---GSGDTFIFTTYLsdttpawsns---------------vgysttvswPAVPGGigaeGNPGMVQALKTTpYGIA 233 Acidithiobacill...
Feature 1                                                                                        
1PC3_A       223 YIGISFLDQAsqrgLGEAQLgnssgnfllpdaqsiqaaaag------------------fasktpanqaismidgpapdg 284 Mycobacterium t...
1IXH_A       193 YVEYAYAKQNn---LAYTKLisadgkpvspteenfanaak--------------------gadwsktfaqdltnqkgeda 249 Escherichia coli
P47652       248 YLSLGFIQNNlq-aIKNNGFeilpikyenkev-------------------------------------lpsnqtvsqne 289 Mycoplasma geni...
P35482       226 YVSPDAVNINs---NAEVSRvngnlptqanvstalgsvappa-----------------naadradpskwvpvftnpsag 285 Pseudomonas aer...
CAL53520     243 YIDSGHGHKDd---LSEIAMqnadgqwvvtktgnpagritaditkaaetvtypkvtgssstdyagdwsginlhhkagdka 319 Ostreococcus tauri
EES52209     223 YLGLGWLEGTp---LVRGSLkndrgefvapgldsvqraaeal----------------grapafpegfdrslvggeisga 283 Leptospirillum ...
EAY58047     227 YAGLFWANKTg---LPFAALenrdgffvtpspasfrkaaldaf---------------vrpdfpfgfnrsivwsipgkea 288 Leptospirillum ...
YP_001406008 201 YTGESYAVNLk---SANLVVndeilt-------------------------------------------------ienkk 228 Campylobacter h...
EAY58276     235 YVGLGWVMEYh---LTTGALknldgefvrgsvdtiraaghaal---------------kdpsfpddfnrsivwnihgknv 296 Leptospirillum ...
YP_002220040 234 YIGISWKKPVeeahLGMAMLenragkfvlptvanakaaage------------------mvkktpaderislvyapgass 295 Acidithiobacill...
Feature 1                                                       
1PC3_A       285 YPIINYEYAIVNNRqkdaataQTLQAFLHWAITdgn--kaSFLDQVH 329 Mycobacterium tuberculosis
1IXH_A       250 WPITSTTFILIHKDqkkpeqgTEVLKFFDWAYKtg----aKQANDLD 292 Escherichia coli
P47652       290 YKWVRPLNSIVSLSeen-kniDEIKTFFNWLFFng----kKDVIKNI 331 Mycoplasma genitalium G37
P35482       286 YSIVGYTNFVFGQCykdasvsTDVRAFINKHYGgtt--tnAAVAAHG 330 Pseudomonas aeruginosa PACS2
CAL53520     320 WPITLFTYIHLKKTysdadteMLARAFAEFILSde---vqKKTRDFM 363 Ostreococcus tauri
EES52209     284 YPVVGVEFWTVNPNlpe-etmQDVRDLLLFVLTrgq--etSFVGKSG 327 Leptospirillum ferrodiazotrophum
EAY58047     289 YPAANFEYFLINTQtde-etmHTIRSFLLWVLGpgqnpalTEKAGFG 334 Leptospirillum sp. Group II UBA
YP_001406008 229 YPITNKSYFVYKKDge---klDEILKFIEFIREn-----gEVLDKYS 267 Campylobacter hominis ATCC BAA-381
EAY58276     297 YPDANFEFWMINTNlda-gtmKDVRNLLMWALTkgq--apKYTVKSG 340 Leptospirillum sp. Group II UBA
YP_002220040 296 YPIINYEYAIVSKTqpnaevaTAMRKFLNWAIDpkggnapHFITAVN 342 Acidithiobacillus ferrooxidans ATCC 53993

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap