Conserved Protein Domain Family
PBP2_taurine

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cd13560: PBP2_taurine 
Taurine-binding periplasmic protein; the type 2 periplasmic binding protein fold.
This subfamily includes the periplasmic component of putative ABC-type sulfonate transport system similar to SsuA. These domains are found in eubacterial SsuA proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding the ligand, SsuA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The SsuA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.
Statistics
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PSSM-Id: 270278
Aligned: 16 rows
Threshold Bit Score: 282.271
Created: 9-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding site [chemical binding site]
Evidence:
  • Comment:based on sequence similarity to other members of the ABC-type nitrate/sulfonate/bicarbonate transporter family.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #                                #                                       
Q47537     24 NVTVAYQTsaePAKVAQADNTFAKESGa---TVDWRKFDSGASIVRALAsgDVQIGNLgsSPLAVAasqqvpiEVFLLAS 100 Escherichia coli K12
NP_902528  28 AVTVGYQTgidPTKVPQADGAYEKATGs---RINWRKFDSGADLIAAVAsgDVAIGNIgsSPLAAAasrglpiETFLVAD 104 Chromobacterium vi...
NP_105367  31 KITIGYQTvvePSKVPQADGAYEKSTKa---TIDWRKFDSGADVIAAVAsgSVDIGYVgsSPLAAAasrelpiQTIFVVG 107 Mesorhizobium loti
ADO77548   42 EINFGILRvpnDQTIAIAQGFFDDYFTergiKVNTRVFDSGVEANQALAsgSIDFATMgnTNAITAlarelkvELIWIHE 121 Halanaerobium prae...
YP_485108  26 KITVGYLNlvnAQLVTKNLGLLAKEMPg--vEIKYVKFGGGGDMLRGIAgnDVDFGGLgnPPTAIGitrglpiKGILVLN 103 Rhodopseudomonas p...
NP_782015  40 VVNIGTQQmpnDEKIAIAKGFFEEELGi---KVNIVEFNAGDIRNAMIAk-NIDFALLgsASATLGiasgmdaEVIWIHE 115 Clostridium tetani...
EFL84507   29 KVRIGYLSlvnGQLLSKYLQLHEKEMGv---PVEWFRFNSGRDVNTAMAskSIDFGNVglPPATIGlaggmnyWGIMNAN 105 Desulfovibrio sp. ...
ADK17464   33 TIKIGVLRvpnDVAVAQERKMLQAKCRqygmKVQFITFDSGVDANKALLsnSVQLATMghTNAVVAmaaripvKLVWIND 112 Lactobacillus para...
ADI91428   53 EVRFAWGGgprVWVLGKADGDFEKALGt---KIKWVEFASGADVINYFAanEIDIARFgsSPAVAGitrglpiEIIGLEG 129 Acinetobacter sp. DR1
EFV86607   31 EVRFAWAGaprVWVLGKADKSFDQALGv---PVKWVQFNTGADVLALFAskQIDIARFgsNPAVSGyaqglpiELISVPE 107 Achromobacter xylo...
Feature 1          #                       #    #                                         ##  
Q47537    101 KlgnsEALVVKKti--skPEDLIGKRIAVPFISTTHYSLLAALKHWGikpgQVEIVNLqppaIIAAWQRGdIDGAYVWaP 178 Escherichia coli K12
NP_902528 105 EigsaEALVARKgsgiakPRDLIGKKVAVPFVSTTHYSLLAALRHWGvdpaQVKILNLrpgeIAAAWQRGdIDAAYVWdP 184 Chromobacterium vi...
NP_105367 108 LigpsEALVARNgagiekLADLAGKKVAVPFVSTTHYSLLAALKHENvdakSVQILNLrppeIAAAFARGdIDAAYVWdP 187 Mesorhizobium loti
ADO77548  122 VlgenEALAVKDgsgikkVKDLAGKRVAVPFASTSHYILLNVLKEAGie-kEVQLLDMqtaeIVAAWERGdVQAAYTWqP 200 Halanaerobium prae...
YP_485108 104 MlgdvESMVVRTskniksLKDLKGKTVAAPFGSTTHYLLLQALADEGvepsSMKILDLppsdIATAWIRGdLDAAWLWeP 183 Rhodopseudomonas p...
NP_782015 116 VlgdaERLVAKTnsninsIKDITGKKIATPFSTTAHYSLLKALELNNisqkDVTIYDMqmsdIYAAWKRGdIDAAYAWeP 195 Clostridium tetani...
EFL84507  106 VlgavESLVVRKdi--nsLKDLEGKTVVAPFGSTTHYLLIKALREAGvdmgKVKIMDMapgeALAPFIRGdIDAAYIWeP 183 Desulfovibrio sp. ...
ADK17464  113 IigsnEALTVRRkahitnWDSFKGKSIATPFASTSHYSLMMLLKHHHlt-gKVRVLDMqtpeIVAAWQRGdIDGAYTWeP 191 Lactobacillus para...
ADI91428  130 LisgaERLIVRPdi--knLQGLVGKKVAFPANSTAQYALEQALALNKidksKIKLIPLkpaeIVSAWTRGdIDAAYVWgP 207 Acinetobacter sp. DR1
EFV86607  108 IittaEQLVVRAdi--kdVKGIEGRTIAYPPNSTAQYALEALLDRGHadraKVKLVPLkpaeIVAAWKRGdIDGAYAWdP 185 Achromobacter xylo...
Feature 1     #                          #                                  
Q47537    179 AVNALEKDg-KVLTDSEQvgqwGAPTLDVWVVRKDFaekHPEVVKAFAKSAIDAqqpYIANP 239 Escherichia coli K12
NP_902528 185 ALGKIKPGg-AVLTSSAEvakwGAPTYDIWVVRKDFaaaHPEFVSRFAKVSLDAisgYLADP 245 Chromobacterium violaceum ATCC 12472
NP_105367 188 ALGQIKTTg-KVVLDSSQvaawGAPTFDAWIVRTDFaqkNPEAVRDFVKVTGAAyaeYLAKP 248 Mesorhizobium loti
ADO77548  201 TLAQLLKSg-STLTNSKKmadkGYITANIDVVRKEFsqkYPELVADFISALSQAgdiYRNNP 261 Halanaerobium praevalens DSM 2228
YP_485108 184 NLDKAVKNggHIYMSSGLmekrGYPTWDIGVVMNGFaekYPDYVEKFVKAECAGidfWIKNP 245 Rhodopseudomonas palustris HaA2
NP_782015 196 TLSDLLKEg-KVLVSSKDltkkGIVTSNVEIVRREFaekYPDIVTKYIKAVNKSiklYNENQ 256 Clostridium tetani E88
EFL84507  184 GLGLVVQNggKILLTSEQmaekGHLTWDVISVQPEFarkYPELVTMFIKSELAAmeyWREHP 245 Desulfovibrio sp. 3_1_syn3
ADK17464  192 SLSALTDG--KVMINSRSmaqrGYLTANVTLATNSFinaHPNILRTILSCLNKVhlqFENDP 251 Lactobacillus paracasei subsp. parac...
ADI91428  208 FTQQLEKEggKEIYRTTTlnekGILVYNNFAVRKEFaekHPDLVIKFLKAYQDQvdeYKRDP 269 Acinetobacter sp. DR1
EFV86607  186 AKAQLVADgaHVVFSTGDlrkdGVLIYNNFVVSKDFaakYPQLVAAFLKNYQKKveeYRQDP 247 Achromobacter xylosoxidans C54

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