4HU2,3TX4,3VAE


Conserved Protein Domain Family
LDT_IgD_like_2

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cd13432: LDT_IgD_like_2 
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IgD-like repeat domain of mycobacterial L,D-transpeptidases
Immunoglobulin-like domain found in actinobacterial L,D-transpeptidases, including Mycobacterium tuberculosis LdtMt2, which is a non-classical transpeptidase that generates 3->3 transpeptide linkages. LdtMt2 is associated with virulence and resistance to amoxicillin. This domain may occur in a tandem-repeat arrangement and is found N-terminal to the catalytic L,D-transpeptidase domain; this model represents the repeat adjacent to the catalytic domain.
Statistics
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PSSM-Id: 240447
Aligned: 80 rows
Threshold Bit Score: 121.085
Created: 17-Dec-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4HU2_A       100 TMPYVMPGDGEVVGVGEPVAIRFDENIa--DRGAAEKAIKITTNPPVEGAFYWLNN------REVRWRPEHFWKPGTAVD 171 Mycobacterium t...
YP_004810629 160 NGVTVTPSKGWTVGIGQPVSLTFDHPVq--NKAAVERTLSISTSPKTEGAWGWTMDplt-giERVDWRPKTYWHKDTKVT 236 Streptomyces vi...
YP_289079    167 EIQSNFPVSGDVVGVGMPVIINFDLPVe--NKAAVEAALEVISEKPTQGAWNWFGD------QTVVFRTEEYWEPYQKVT 238 Thermobifida fu...
ZP_10070098  137 VNTVVLAPVGKTIGIAHPVSIAFTKPVk--NKAEVEKALKVTTDNNTEGSWGWVKDfh--gkDRIDWRPRNYWKPGTKVT 212 Streptomyces ts...
ZP_19194760   71 DGAKVNIVEGQTVGVGMPISVTFDHVIpeaERDDVERQLKVTTDPGVEGAWSWIEDrglgegRRVDFRPRSYWKPGTKVT 150 Streptomyces ip...
CCK28700     137 NKVDWRPGADATVGVAQPISLVFDHPVk--NKAEVEKQLRITTSNDTEGSWGWIRDws--grDRVDWRPKEYWKPGTEVT 212 Streptomyces da...
YP_006639257 151 EVASTFPADGQTVGVGMPVIVDFGRPVt--NKTQVENSIQVVSEEATRGAWNWLTD------ETAVFRPEEYWEPHQKVT 222 Nocardiopsis al...
YP_003112917 164 YAGTYTPDPGTTYGVAQPVSITFDKPIp--DKAAVEKQLTVTSDPPVAGSWHWFGS------ERVDFRPQQYWAPGTKVT 235 Catenulispora a...
ZP_08801968   42 FVGTYNPDKGTKVGVAMPVSITFNKPIh--DKAAVERNLKVTATPAVEGAWSWMKDrd--gkDRVDYRPKEYWKPGTDVT 117 Streptomyces sp...
CCK27329     134 FTGSFTPEDGSKVGVGMPFSLRFDRGIt--NPDEVRNAVTIKTEPAVDVKGHWFGN------DRLDFRPEKYWKEGTKVT 205 Streptomyces da...
4HU2_A       172 VAVNTYGVDLG-EGMFGEDNVQTHFTIG 198 Mycobacterium tuberculosis
YP_004810629 237 LRAHLSGVNTG-DSRYLRRDVSTTFTIG 263 Streptomyces violaceusniger Tu 4113
YP_289079    239 VNMRLAGVQAA-EGVYGVKNYQLNFEVG 265 Thermobifida fusca YX
ZP_10070098  213 LDARLNGVDSGpSGGFLVKDYRLSFAIG 240 Streptomyces tsukubaensis NRRL18488
ZP_19194760  151 VRVGAGITRHFtIGRSLIATVDVREHTM 178 Streptomyces ipomoeae 91-03
CCK28700     213 LDAELNGTDSGpDGGWFVRDYTTEFTIG 240 Streptomyces davawensis JCM 4913
YP_006639257 223 VDLRLAGVEAS-DGVYGTTDRRLEFEVG 249 Nocardiopsis alba ATCC BAA-2165
YP_003112917 236 LHMRLDGVKSGsLYGKQNRDVTFTIGRS 263 Catenulispora acidiphila DSM 44928
ZP_08801968  118 LRMDLAGVNAG-GGVYGTQQRVVNFRIG 144 Streptomyces sp. CCNWNQ0016
CCK27329     206 VDLNLDGVEGR-DGVYGEQKKTVTFTIG 232 Streptomyces davawensis JCM 4913
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