4HU2


Conserved Protein Domain Family
LDT_IgD_like_1

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cd13431: LDT_IgD_like_1 
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IgD-like repeat domain of mycobacterial L,D-transpeptidases
Immunoglobulin-like domain found in actinobacterial L,D-transpeptidases, including Mycobacterium tuberculosis LdtMt2, which is a non-classical transpeptidase that generates 3->3 transpeptide linkages. LdtMt2 is associated with virulence and resistance to amoxicillin. This domain may occur in a tandem-repeat arrangement and is found N-terminal to the catalytic L,D-transpeptidase domain; this model represents the first (N-terminal) repeat in LdtMt2 and related proteins.
Statistics
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PSSM-Id: 240446
Aligned: 21 rows
Threshold Bit Score: 81.2052
Created: 17-Dec-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4HU2_A         1 SMADLLVPKLTASVTDGAV-GVTVDAPVSVTAADGVlAAVTMVNDNGRPVAGRLSp--DGLRWSTTEQLGYNRRYTLNAT 77  Mycobacterium t...
YP_006806540   5 NPLLELIKPKLMSPVKDGDvGVSPGVPLAFHVEDGRfTNVTLVNAQDKPVAGKLAa--DGRSWETTEVLGYGKTYRLKAD 82  Nocardia brasil...
YP_004007760  38 NPLLSLIKPVVTTTVTDGAvGYSPGDPVAVRVADGRlVDVELRNPEGRAVAGVVAp--DGLSWTNTEPLGYNRKYTLRAD 115 Rhodococcus equ...
ZP_10003257   34 GPATPPPGPKITVSPADGTaTVNPLDPVSVNTTGGTlETVTMTNDEGRVIEGIFTp--DRLSWKPGVPLGYGRTYTLAVT 111 Rhodococcus imt...
ZP_11108435   34 GGASPTRLPTSALEPANGA-VVGVGHPVTIRFGAPVaDRAVAERAVEITTSKPVS---GHFAWLDDRRVQWVPDDLWPGH 109 Rhodococcus sp....
ZP_07965541   33 DGTVSAQNGVVSVSPAEGE-TVGVAAPVTIRFAGPVaDRAAAQQAVGFSASNVPD---GAFSWPDDATMRWTPSGYWPSH 108 Segniliparus ru...
ZP_09084627   27 TAAIHNPVPVADIAPADGA-IVGVAHPVEVTFAAPVvNRLAAQRSIRIISDNAPA---GEFSWLGDRVVRWTPDGYWPAH 102 Mycobacterium t...
YP_006810342  29 MAGTATANPIELIGPSDGQ-VVGVAHPVTIRFAQPVtDRAATERTVDIRATDPLP---GTFAWTTDREVVWTPTGYLPAS 104 Nocardia brasil...
YP_001134563  39 TATAAVDTGVATVSPGPGQ-TVGVAHPVTVTFTEPVrDRTAAENSISVAPAGTSApmpGTTRWLDGRSVQWEPAEFYPAH 117 Mycobacterium g...
ZP_10000913   43 SPAVTGKVVAPTLSPASGQ-VVGIAHPVVVRFASPVsDRALAERGVQITPSKPVP---GQFSWIDDRTVQWTPDHFWPPD 118 Rhodococcus imt...
4HU2_A        78 ALGLGg-aATRQLTFQTSSP 96  Mycobacterium tuberculosis
YP_006806540  83 AIGLGg-aNSATLSFTTSSP 101 Nocardia brasiliensis ATCC 700358
YP_004007760 116 AYGLGg-sTSTTLTFTTSAP 134 Rhodococcus equi 103S
ZP_10003257  112 AIGDQgirSEKTSTFSTVTP 131 Rhodococcus imtechensis RKJ300
ZP_11108435  110 TTVTVa-vAGARTQFQVGDE 128 Rhodococcus sp. P14
ZP_07965541  109 STVTVv-aAGYPHKFRTGAE 127 Segniliparus rugosus ATCC BAA-974
ZP_09084627  103 SSVSVl-aGGIKTNFRTGSV 121 Mycobacterium thermoresistibile ATCC 19527
YP_006810342 105 ARISVg-vGQARTEFRTNVG 123 Nocardia brasiliensis ATCC 700358
YP_001134563 118 TPITVs-vGGFSTGFQTGSS 136 Mycobacterium gilvum PYR-GCK
ZP_10000913  119 TRVTVe-gAGARSQFQVGDA 137 Rhodococcus imtechensis RKJ300
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