Conserved Protein Domain Family
TNFRSF11B_teleost

?
cd13412: TNFRSF11B_teleost 
Tumor necrosis factor receptor superfamily 11B (TNFRSF11B) in teleost; also known as Osteoprotegerin (OPG)
This subfamily of TNFRSF11B (also known as Osteoprotegerin, OPG, TR1, OCIF) is found in teleosts. It is a secreted glycoprotein that regulates bone resorption. It binds to two ligands, RANKL (receptor activator of nuclear factor kappaB ligand, also known as osteoprotegerin ligand, OPGL, TRANCE, TNF-related activation induced cytokine), a critical cytokine for osteoclast differentiation, and TRAIL (TNF-related apoptosis-inducing ligand), involved in immune surveillance. Therefore, acting as a decoy receptor for RANKL and TRAIL, OPG inhibits the regulatory effects of nuclear factor-kappaB on inflammation, skeletal, and vascular systems, and prevents TRAIL-induced apoptosis. Studies in mice counterparts suggest that this protein and its ligand also play a role in lymph-node organogenesis and vascular calcification. Circulating OPG levels have emerged as independent biomarkers of cardiovascular disease (CVD) in patients with acute or chronic heart disease. OPG has also been implicated in various inflammations and linked to diabetes and poor glycemic control. Alternatively spliced transcript variants of this gene have been reported, although their full length nature has not been determined. Genetic analysis of the Japanese rice fish medaka (Oryzias latipes) has shown that entire networks for bone formation are conserved between teleosts and mammals; enabling medaka to be used as a genetic model to monitor bone homeostasis in vivo.
Statistics
?
PSSM-Id: 276917
Aligned: 7 rows
Threshold Bit Score: 211.963
Created: 5-Oct-2012
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Feature 1:CRD1 [structural motif]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1        ##           #####################################                              
AEC32094      17 CEdd-------aaPTYKHRDPSTGKILTCKKCEPGKYMAAHCTATTDTKCLPCGAaHYTELWNYLPKCLYCnNICSlNQE 89  Japanese medaka
CAF99995     338 CGfvv-----dsiPTYEHLDPSTGKTLLCDKCRPGTHLAAHCTPSTPTKCLPCEEnQFTELWNYLPRCLYCsNYCDdSQE 412 spotted green p...
XP_003443751  20 CGasvv----dpvPTFDHRDPVTGEILKCPKCPPGTFMSAHCTATTRTQCQSCRDgHFTDLWNYLPRCLYCsNICTgNQE 95  Nile tilapia
NP_001239168  17 CEdd-------aaPTYKHRDPSTGKILTCKKCEPGKYMAAHCTATTDTKCLPCGAaHYTELWNYLPKCLYCnNICSlNQE 89  Japanese medaka
XP_007571184  18 CAae--------dPTYEHQDRTTGEILQCKQCKPGTYRTAHCTATKETKCVPCPSdHYTELWNYLNRCLYCnNFCSqNQE 89  Amazon molly
ACI69159      16 CSamkevlqsqtpTTYQHLDPTTGQLLTCNRCPPGHHMSAHCTAATQTVCTPCPSsHYTQYWNYLHKCLYCgTFCGeHQV 95  Atlantic salmon
XP_006636131  23 HGk---------yRTYQHRDPVTGKMLLCNQCPPGTHLQNHCTTKHQTVCALCPAqHYTQYWNYLPMCLYCnNFCReNQF 93  spotted gar
Feature 1                                                                
AEC32094      90 VEIECSATKNRVCRCKQGYYmkDDFCIQHSECgpGHGVRTKGTSqqDTICKKCADG 145 Japanese medaka
CAF99995     413 VAKECSATNDRVCRCKEGLYssSGFCFSHSECqpGLGSKSKERQk-RTRCVNAVSM 467 spotted green pufferfish
XP_003443751  96 VETECSPTTNRTCRCKEGFYsaDDFCIRHTECgrGYGVQTKGETl-RTFLSGFFHS 150 Nile tilapia
NP_001239168  90 VEIECSATKNRVCRCKQGYYmkDDFCIQHSECgpGHGVRTKGTSqqDTICKKCADG 145 Japanese medaka
XP_007571184  90 VEIECSATNNRVCRCKAGFYmmEDFCVRHTECgpGHGVQAIGTPknDTVCEKCPKG 145 Amazon molly
ACI69159      96 VKEECSVLNDRVCECKEGYYwdSDFCIRHTECpsGYGVKRRGTTetDTECEKCPHG 151 Atlantic salmon
XP_006636131  94 VKEECSPTYNRVCECKKGYYwdSEFCIKHTECpsGYGVKAKGTAnkDTVCEKCLSG 149 spotted gar

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap