Conserved Protein Domain Family
FERM-like_C_SNX27

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cd13338: FERM-like_C_SNX27 
Atypical FERM-like domain C-lobe of Sorting nexin 27
SNX27 is localized to early endosomes and known to regulate the intracellular trafficking of ion channels and receptors. SNX27 contain a N-terminal PDZ domain, a PX domain, and a FERM-like domain. SNX27 regulates trafficking of a PAK interacting exchange factor-G protein-coupled receptor kinase interacting protein complex via its PDZ domain interaction. Sorting nexin 27 interacts with multidrug resistance-associated protein 4 (MRP4). SNX27 binds Ras GTPase through its FERM-like domains. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. These interactions place the PX-FERM-like proteins at a hub of endosomal sorting and signaling processes. These proteins participate in a network of interactions that will impact on both endosomal protein trafficking and compartment specific Ras signaling cascades. The typical FERM domain has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. FERM domains are found in cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 270146
Aligned: 17 rows
Threshold Bit Score: 139.032
Created: 14-Sep-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003212858 329 NEIIFPHCScdsrrkgHVITAISIKHFKLHACTee-gQLENQVIAfEWDEMQRWDTdeeGMAFCFEYarg-ekkPRWVKI 406 turkey
EFX83312     389 GEVVFPHCGcdarkegHVIPSLGFNAFRLQACKed-gSLQSQVIEfGWETILAWEVddeGMAFCLQYhrp-dksPRWVRI 466 common water flea
NP_727023    428 GDVVFPHCScdsrkegHVVPAVGMKSFRLHACRed-gSLEAQMVElTWDSITRSESdeeSMSFCFQYnrp-dkpARWVKV 505 fruit fly
EFR20876     392 GDIVFPHCTcdsrkegHVVPAVGMKSFRLHACRed-gALEAQTVElQWATISRWESdeeSMAFCFQYsrs-dkpPRWVKV 469 Anopheles darlingi
EFZ11391     362 GDIVFPHCAcdsrkegHVVPAVGMATFKLHAAKed-gTLESQVVEfQWNTIVRWEVdedGMAFCFQYtrqdnrpPRWLKV 440 red fire ant
XP_780387    413 GMMVFPHCScdakksgHVIPSVSYKKFTLQACKed-gTLEAQAPSfEWDEISQYETdeeGMVFCFEYtkp-gkkPRWVRV 490 purple urchin
XP_003745088 394 SEISFPHCNcdarkegHVVASVGKVNFKLQACKed-gTLENQIIEfDWDHISGWEAdedGMAFQFEYarp-dkkPRTVRI 471 western predato...
XP_002164360 570 GDIVFPHCEcdarkegHVILRLSLKNLTMVACTsd-gVKEDQEHNfTWDEIQSWDAdteAMCFWFQYsks-grnPRQVRI 647 green hydra
XP_002110491 445 NTVVFPHCAsnvrkngNVIVSISKSGLALTACTnt-gELEEQEHKfNWDSIIEWETdedEASFNFRYnre-nmpPRLVKL 522 Trichoplax adha...
XP_003388361 420 NNVLFPHCKcdarktgHVIMSVGSGGIGLKACSdegvKEDKQEHFfSWDMVNKFEAdveEQAFTFQYtre-gkePRWIRV 498 Amphimedon quee...
XP_003212858 407 FTPYFNYMHECFERVFCELKWRKE 430 turkey
EFX83312     467 FTPYFVYMCDCFDRVQEERKWSEQ 490 common water flea
NP_727023    506 YTPYHAFLADCFDRIMEERKWEDS 529 fruit fly
EFR20876     470 FTPYVKWIHLRAIQKDDGANKSAR 493 Anopheles darlingi
EFZ11391     441 FTPYVSILSEEPIAKRFATATRVI 464 red fire ant
XP_780387    491 FTKYYEFLNECFARVLKEREWCRE 514 purple urchin
XP_003745088 472 YTQYFVFMMDCFERVAEERKWATN 495 western predatory mite
XP_002164360 648 YSLYYKYIEDCCKRIATELSWCKK 671 green hydra
XP_002110491 523 YTDYDMYMKECFDRVIAELEWERE 546 Trichoplax adhaerens
XP_003388361 499 YSPYYLYMERCVERVKEELKWKKP 522 Amphimedon queenslandica
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