4GXB


Conserved Protein Domain Family
FERM-like_C_SNX17

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cd13337: FERM-like_C_SNX17 
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Atypical FERM-like domain C-lobe of Sorting nexin 17
SNX17 is a beta1-integrin-tail-binding protein that interacts with the free kindlin-binding site in endosomes to stabilize beta1 integrins, resulting in their recycling to the cell surface where they can be reused. SNX17 contains a N-terminal PX domain, a FERM-like domain, and a unique C-terminal region. SNX17 binds Ras GTPase through its FERM-like domains. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. These interactions place the PX-FERM-like proteins at a hub of endosomal sorting and signaling processes. These proteins participate in a network of interactions that will impact on both endosomal protein trafficking and compartment specific Ras signaling cascades. The typical FERM domain has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. FERM domains are found in cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 270145
Aligned: 15 rows
Threshold Bit Score: 144.412
Created: 14-Sep-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4GXB_A       161 YGYLRFDACVAdfp-----ekDCPVVVSAGNSELSLQLrlpg---qqlrEGSFRVTRMRCWRVTSsvplpsgsts----- 227 human
NP_001038622 268 YGYIKFDPCITdfp-----ekGCHVIVGAGNNELNFHVklpn---eqmkEGSFKVTRMRCWRVTSsqvpvangta----- 334 zebrafish
EFW43551     274 FGYIELDPCVCshp-----apDSRVIVAIGSNDLRVRLvgqk----rseAATFRVRRTRCWKLSAhd------------- 331 Capsaspora owcz...
XP_795102    270 YGTLQFKQCTVnyp-----epETKTVINTGNKELYFRVelpd---kstkEGVFRITRMRCWRITNsadkearrlsgaepi 341 purple urchin
XP_002117154 265 YGYIVFEMCTCdyp-----keNTKVLVSIGDMALNIKVflee---gkvkAGSFKLTRMKCWKTVAkreen---------- 326 Trichoplax adha...
NP_609353    280 YGCLQFDEAQVdyp-----epDTMALISIGNKELALRTargv----kiyETKFRVTRMRSWRVSVthitle--------- 341 fruit fly
EHJ73853     267 YGSVPAGEAITeainvgdsngSIRVRVSLASKELTLTSldt------rhEQRYKVTRMRCWRITTlhtmerqqtng---- 336 monarch butterfly
XP_003380724 271 YGFVFFEQCFCsyp-----klNTVAHVAVGNRRLLILHevsqascgeikEITFRVTRIRSWRLSIlsi------------ 333 Trichinella spi...
EFX81892     269 YGGVNFLPCITdfp-----taGTPVSIHALNKELVFCYpd-------ltERSFRVTRMRSWRITTivqvkhit------- 329 common water flea
EFO22578     284 YSYEVLEPCSSnyp-----rpGTECNLKVGRRHILLEFkdeet-kdgvaRAEFRATRIRVWRISQhd------------- 344 Loa loa
4GXB_A       228 --spgrgrgevRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKS 280 human
NP_001038622 335 -npsssskcdvKLELAFEYLMSKDRLQWVTITSQQAIMMSICLQSMVDELMVKKS 388 zebrafish
EFW43551     332 ----------kVVDFAFDYLFGPNELRWVTMAGPQTIYMSMCVQSVVDELLEKIK 376 Capsaspora owczarzaki ATCC 30864
XP_795102    342 vvdnspkkkdsQLELSFEYLVAKNKLQWVTIRSQQAILISLCLQSMVDELLLQKK 396 purple urchin
XP_002117154 327 -------sdeyLFILSFEYLMSKEKLQWISIASSQAIFMSMCLKDMAQEHVRGRR 374 Trichoplax adhaerens
NP_609353    342 -----srleptHLQLAFEYLIGKQTLRWITINSDQAMLMSVCLQAMVDELLQRGA 391 fruit fly
EHJ73853     337 -hdslmdepskNFELSFEYLISKDNLVWVTLRTEHAIFISVCLQSIVEELMRQKN 390 monarch butterfly
XP_003380724 334 ---------hgSQDLSFEYLFSNNHLEWITLRSSQSVLISRCLQSMIEEIVSSQA 379 Trichinella spiralis
EFX81892     330 ---hnsnvdhpKLELSFEYLLSKDRLQWITVDSAQVIFLSLCLQSMVEELMRKQQ 381 common water flea
EFO22578     345 ---------nnGFTFLFEYLISKGIFQWITLYTNQAILLSLLLQSIGFEILKEHR 390 Loa loa
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