Conserved Protein Domain Family
FERM_C_JAK1

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cd13332: FERM_C_JAK1 
FERM domain C-lobe of Janus kinase 1
JAK1 is a tyrosine kinase protein essential in signaling type I and type II cytokines. It interacts with the gamma chain of type I cytokine receptors to elicit signals from the IL-2 receptor family, the IL-4 receptor family, the gp130 receptor family, ciliary neurotrophic factor receptor (CNTF-R), neurotrophin-1 receptor (NNT-1R) and Leptin-R). It also is involved in transducing a signal by type I (IFN-alpha/beta) and type II (IFN-gamma) interferons, and members of the IL-10 family via type II cytokine receptors. JAK (also called Just Another Kinase) is a family of intracellular, non-receptor tyrosine kinases that transduce cytokine-mediated signals via the JAK-STAT pathway. The JAK family in mammals consists of 4 members: JAK1, JAK2, JAK3 and TYK2. JAKs are composed of seven JAK homology (JH) domains (JH1-JH7) . The C-terminal JH1 domain is the main catalytic domain, followed by JH2, which is often referred to as a pseudokinase domain, followed by JH3-JH4 which is homologous to the SH2 domain, and lastly JH5-JH7 which is a FERM domain. Named after Janus, the two-faced Roman god of doorways, JAKs possess two near-identical phosphate-transferring domains; one which displays the kinase activity (JH1), while the other negatively regulates the kinase activity of the first (JH2). The FERM domain has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 275412
Aligned: 5 rows
Threshold Bit Score: 225.109
Created: 15-Aug-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative actinputativeputative
Feature 1:putative actin binding site 2 [polypeptide binding site]
Evidence:
  • Comment:ERM and merlin proteins might utilize interaction of the second masking motif with the FERM domain to compete with and suppress the binding of this region to actin

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
NP_002218     282 GAEIFETSMLLISSENEMNwfhsn-dggnVLYYEVMV------------------TGNLGIQWRHKPnvvsvekeknklk 342  human
ACU12480      281 GSELFEPISLSVMQEGELCng------gyYGYYNHSQgqsqsqsmetshdmqvlvAGTTGISWRKKPattaviskekgks 354  Chinese perch
NP_001086862  268 GAEIFETNHLIIKSENEQNgfnng-dydsMHHYEVSV------------------TGNSGINWRRKPtctasekdrkikw 328  African clawe...
NP_990201     282 GAEIFETSSLLISSESEINrfncg-dgeiIPLYEVIV------------------TGNNGIQWRLKPssvqtekkkk--- 339  chicken
O12990        280 GREIFKPKNLKVTGESEGSpaqmlplgdnGMGYEVQV------------------YGTTGISWRRKPapnqlilkdkpk- 340  zebrafish
Feature 1                                                                        ############     
NP_002218     343 rkklenkhkkdeeKNKIREEWNNFSYFPEITHIVIKESVVSINKQDNKKMELKLSSHEEALSFVSLVDGYFRLTADAHHY 422  human
ACU12480      355 -kknkldgkqkndKKEANEGWVVFCDFHEITHTVIKEAMVTIYRQDNKRMELQMASRAEALSFAALVDGYFRLTVDAHHY 433  Chinese perch
NP_001086862  329 -kktesksknsdkKGKSKDEWHCFSYFPEITHIVIKEDTVIINNQDNKSMELKLSTPEEALSFAALIDGYFRLTADAHHY 407  African clawe...
NP_990201     340 ---sdgkikkdedRYKTRDLWNNFSYFPEITHIVIKESTVSINKQDNKKMELKLSSHDEALSFASLIDGYFRLTADAHHY 416  chicken
O12990        341 --skkikgdkqwnDKKKDSGWTLFSDFHEITHIVIKDCCVTIYRQDNKTMELDLFYRDAALSFAALVDGYFRLTVDAHHY 418  zebrafish
Feature 1             
NP_002218     423 LCTD 426  human
ACU12480      434 LCKE 437  Chinese perch
NP_001086862  408 LCSD 411  African clawed frog
NP_990201     417 LCTD 420  chicken
O12990        419 LCTD 422  zebrafish

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