Conserved Protein Domain Family
PH_RARhoGAP

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cd13319: PH_RARhoGAP 
RA and RhoGAP domain-containing protein Pleckstrin homology PH domain
RARhoGAP (also called Rho GTPase-activating protein 20 and ARHGAP20 ) is thought to function in rearrangements of the cytoskeleton and cell signaling events that occur during spermatogenesis. RARhoGAP was also shown to be activated by Rap1 and to induce inactivation of Rho, resulting in the neurite outgrowth. Recent findings show that ARHGAP20, even although it is located in the middle of the MDR on 11q22-23, is expressed at higher levels in chronic lymphocytic leukemia patients with 11q22-23 and/or 13q14 deletions and its expression pattern suggests a functional link between cases with 11q22-23 and 13q14 deletions. The mechanism needs to be further studied. RARhoGAP contains a PH domain, a Ras-associating domain, a Rho-GAP domain, and ANXL repeats. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Statistics
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PSSM-Id: 270129
Aligned: 27 rows
Threshold Bit Score: 126.585
Created: 16-Aug-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6IFT4         84 RTLLIDGPVElk---rGLQRQERHLFLFNDLFVSakikynnnFKIKNKIRLtdmWTASCVEevgeg-nmnaqKSFVLGWP 159  house mouse
XP_002739662  149 RAYVMEGPVQlt---tGVQSQHRYFFLFNDVLLIaktksgtnFRLKQKIRVnemWVGSCLEevcet-nksaeRSFVLGWP 224  Saccoglossus ...
XP_002425277   85 RVFLLETPVQft---tGVQSQERHLFLFNDLLLVakarsggnFKLKEKVRIseiWMTKCSMedvievhksqeTSFVIGWP 161  human body louse
XP_002112455  323 RQFIYEGVVDmn---tGFQTVPRYLFLLNDILIIakpk-gstFRLKNLIRVtdiWLSESFDdvcev-vqhpdKSFVIGWP 397  Trichoplax ad...
XP_002406064  127 RYFIMDGPAQfs---iGLQNQERHLFLLSDVLLIakpkssgsYKLKEKVRTcemWLSNCLAdvses-trsvdTSFVIGWP 202  black-legged ...
XP_002589807   84 RQYIMEGPVQlt---qALQTQDRYLFLFSDIVLVakpksantFKLKHRVRLsemWLATCLDevcet-tktldKSFVIGWP 159  Florida lancelet
XP_974029     145 RLFLVEAPCTmaplhmPHNAKPRHLFLFSDLLLVakprsntsFKLKESVRVselWIAPCPDs---------eTGFLLGWP 215  red flour beetle
XP_003727559  100 RLYIMEGPVQis---iGPQIQNRYLVLMNDTLLIakpksatsLRLKHRLRVgelWLNTCIDevsev-ikshdCSFVLGWP 175  purple urchin
EHJ73532       94 RTFIMEAPVQlcplgsTSPPLERHLFLFSDLLLVgksrgtncFKLKESVRLaelWLSLPESd---------dTGFLIGWP 164  monarch butte...
ADY41042       82 RSYLKEGAVQlta-ldSLLTHSRYLFLFSDLLLVakqkaansYKLKEKVRLdriWIASNNCp----------HSFLIGWP 150  pig roundworm
Q6IFT4        160 t----vNFVATFSSpeqKDKWLSLL 180  house mouse
XP_002739662  225 i----aNNVVTFPSadvKQLWLDTL 245  Saccoglossus kowalevskii
XP_002425277  162 t----tNVVATFSTqatRDLWWNKL 182  human body louse
XP_002112455  398 i----vNYLATFSTveeRNLWFQLL 418  Trichoplax adhaerens
XP_002406064  203 t----tNVVVTFRGrgsSYDLCAPL 223  black-legged tick
XP_002589807  160 t----tNTVATFSTpelKELWWDAL 180  Florida lancelet
XP_974029     216 sp--arTYLVTFCTqaaRDSWWREL 238  red flour beetle
XP_003727559  176 t----nNVVLTFASnqeRELWWQKL 196  purple urchin
EHJ73532      165 tvsgvtNYLATYPTqaaRDTWYRKI 189  monarch butterfly
ADY41042      151 i----sNFIAHFSTeeeKTKWQTVL 171  pig roundworm
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