3FM8,3LJU,3MDB


Conserved Protein Domain Family
PH1_ADAP

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cd13252: PH1_ADAP 
Click on image for an interactive view with Cn3D
ArfGAP with dual PH domains Pleckstrin homology (PH) domain, repeat 1
ADAP (also called centaurin alpha) is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. This cd contains the first PH domain repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Statistics
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PSSM-Id: 270072
Aligned: 24 rows
Threshold Bit Score: 142.784
Created: 19-Apr-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphoinositide binding site [chemical binding site]
Evidence:
  • Structure:3MDB; Human Centaurin Alpha-1 PH domain binds the IP4 moiety of the dioctanoyl-PIP3, contacts at 4A
  • Structure:3LJU; Human Centaurin Alpha-1PH domain binds the IP4 moiety of the dioctanoyl-PIP3, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                #  ###     #            # #       #                                   # 
3FM8_C       148 GYREGFLWKRGRDNGQFLSRKFVLTEreGALKYFNRNDAKEPKAVMKIEh-LNATFQPAKIGHPHGLQVTYLKDNS-TRN 225 human
3MDB_C       148 GYREGFLWKRGRDNGQFLSRKFVLTEreGALKYFNRNDAKEPKAVMKIEh-LNATFQPAKIGHPHGLQVTYLKDNS-TRN 225 human
BAE93279     126 GSKTGALFKRGKDNGRYHRRKFILKEpeGVLKYFIRYSDKTPKDVIPIKdlVSIYVVPGKMGNENGMQLTYEKNGT-RRN 204 Ciona intestinalis
NP_001071906 131 GMKEGMLWKRGKDGKQFKQRRFVLNMdeGTLKYFVKPDAKEPKQIINLTt-LSTSLAPDKINHPHGLQLAFMNDNL-TRQ 208 Ciona intestinalis
XP_001639982 130 GSKTGILKKKKKDENQWKDKLFVLNQdeNSLCYFLQATDPHPKDVLKITe-VNVVFAEEKSDKPNSLQFTWVKEGK-TRN 207 starlet sea ane...
XP_001658794 131 GHMEGFLMKRGKEDSRYQLRKFILSEa-DDTLRYFVKEKREPKAILRISe-LNVVFAPAKIGNPNSLQLTFMKDGT-TRH 207 yellow fever mo...
XP_002110212 132 TAKRGFLWKKGKIKNEWNRRLFVLSDdaTTLSYFINEKDIEPKSEMSVEciNATLVGKQKLGKPYGLQLLYKESDGkTRN 211 Trichoplax adha...
ACN32215     130 SYLEGTLMKRAKDENKYYQRKFILAD--NTLKYFSKENAKEPKATINLSe-LNVCLSPSKMSQENGLQLSYMCDGS-TRH 205 Marsupenaeus ja...
XP_002607018 130 GYKEGFLWKRGKENSTFQQRRFILAEedDILKYYQKADAKEPKAAIKISe-LNANFTPEKIGNPNGLQISWVKDGS-TRN 207 Florida lancelet
EFX75755     130 GTMEGFLFKRSKVDDSCKQRRFVLSEr-DNTLKYYVSNKKDPKAEIRILd-MNVAFAPEKLKPPTSLQITYINQGS-TRH 206 common water flea
Feature 1                                       
3FM8_C       226 IFIYHEDGKEIVDWFNALRAARFHYLQVAFP 256 human
3MDB_C       226 IFIYHEDGKEIVDWFNALRAARFHYLQVAFP 256 human
BAE93279     205 IYVYGEDGKTTSDWYHAIRASMVKHKYENFP 235 Ciona intestinalis
NP_001071906 209 IYLYADEAKDAVDWYIVLRASSFHLIRKSYP 239 Ciona intestinalis
XP_001639982 208 YFVCSDSGKDIVDWYMAIRAAKLNLLGLNKP 238 starlet sea anemone
XP_001658794 208 IYVYHDDPKEINNWYMAIRCAKLHRLQIAYP 238 yellow fever mosquito
XP_002110212 212 FYMYSESGKEVIDWLCAIRTAKAAVLGCLYK 242 Trichoplax adhaerens
ACN32215     206 IYVYHESGETIIHWYTAIRSIKLNWLMVAYP 236 Marsupenaeus japonicus
XP_002607018 208 IYVYTEDGKDIVDWYTSVRAAKYNMLKVAYP 238 Florida lancelet
EFX75755     207 IYVYHDDAEVIVEWYMAIRSAKLNLLQVAHP 237 common water flea

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