Conserved Protein Domain Family
PH-GRAM_MTMR5_MTMR13

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cd13208: PH-GRAM_MTMR5_MTMR13 
Myotubularian (MTM) related 5 and 13 proteins (MTMR5 and MTMR13) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
MTMR5 is a catalytically inactive phosphatase that plays a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. It lacks several amino acids in the dsPTPase catalytic pocket which renders it catalytically inactive as a phosphatase. MTMR5 is the most well-studied inactive member of this family and has been implicated in cellular growth control and oncogenic transformation. MTMR13 is a catalytically inactive phosphatase that plays a role as an adapter for the phosphatase myotubularin to regulate myotubularintracellular location. It contains a Leu residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase. MTMR13 has high sequence similarity to MTMR5 and has recently been shown to be a second gene mutated in type 4B Charcot-Marie-Tooth syndrome. Both MTMR5 and MTMR13 contain an N-terminal DENN domain, a PH-GRAM domain, an inactive PTP domain, a SET interaction domain, a coiled-coil domain, and a C-terminal PH domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold. The PH domain family possesses multiple functions including the ability to bind phosphoinositides via its beta1/beta2, beta3/beta4, and beta6/beta7 connecting loops and to other proteins. However, no phosphoinositide binding sites have been found for the MTMRs to date. Although the majority of the sequences are MTMR 5 and 13, this cd also contains MTM5 nematode sequences.
Statistics
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PSSM-Id: 275396
Aligned: 11 rows
Threshold Bit Score: 179.858
Created: 24-Jan-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003341969  922 EECVLDGLRVYLLPDGREEgsgg-svggPALLPAEGAVFLTTYRVIFTGMPTDPLVGEQvVVRSFPVASLTKEKRISvq- 999  gray short-ta...
XP_003428341 1736 EEIVCEGLRVLLDPDGREEatgg-llggPHILPAEGALFLTTYRIIFKGTPHDQLVGEHtVMRSFPIASITKEKKITiq- 1813 platypus
EHJ71608      766 EASAGGALRAVLLADGRSAa-------lPQLLPAEGALFLTNYRLLFKGVPVDPYACEAtVVRSFPLSALTREKGVRaa- 837  monarch butte...
XP_003740009  844 ETFIAEEIRAYLLPDGRQEdl------vMPLIPSEGALFVTNYRIIFKGTPIDPYLCEHnVIRAFPIASLSKDKKIAfpk 917  western preda...
XP_001179450  868 EEKVMEGLRGYLVLDGREEgqgg-vmggPTLLPAEGAVFLTTYRIIFKGTPIDMQACEQvVTRSFPVSALVKEKKINvtn 946  purple urchin
ADY40085      876 EHVLLGGMRVFLLNDGRSLgnvc-gdspQSLLPAEGAIFLTNYRLVFKGQPCDPFLCEQvVIRTVTIMSITKEKQIAdqs 954  pig roundworm
Q9TXP3        798 EFLISDPIDCYLLTSIEESemsl--nrlENLLPADGSLFLTNYRVIFKGKSVDINATNGtIVQTIPLYSMESFKKLTnkk 875  Caenorhabditi...
EFX89301      894 ERLLVEGMRVYLLPDGREEgpc---sagMSLLPAEGALFLTNYRIIFKGTPCDPLVCEQ-TVRAFPVTSLTKEKRISvqy 969  common water ...
Q9VGH9        933 EDLVTDHLRCFLMPDGREDe-------tQCLIPAEGALFLTNYRVIFKGSPCDPLFCEQvIVRTFPIASLLKEKKISvly 1005 fruit fly
XP_002434049  921 EELAMEGLRAYLIPDGREEgtgssalggPCLLPAEGAVFLTNYRVLFKGTPLDPYACEQtVVRSFPVATLTKEKKIAvqy 1000 black-legged ...
XP_002591083 1244 EDIVMEGLRSYLIPDGREEgtgg-smggPALLPAEGAVFLTTYRTIFKGIPCDPLASEQiVVRSFPVASLTREKKINvqy 1322 Florida lancelet
XP_003341969 1000 -----------aHMDQFLQDGLQLRSCTFQLLKMAFDE-EVGSESAEVFRKHL 1040 gray short-tailed opossum
XP_003428341 1814 -----------nQLQQNMQEGLQITSASFQLIKVAFDE-EVSPEVVEIFKKQL 1854 platypus
EHJ71608      838 ----------paHLEHAPHDALQLRAATFQLIKVALDE-EVSSEQAESFRKAV 879  monarch butterfly
XP_003740009  918 ----------dlNMEQCHSDCLQLRSHTFELMKIAVDL-EVPPEKIDLLRQQW 959  western predatory mite
XP_001179450  947 i-------gntfHLDQFLPEGIQLRSNTFQLMKIVFDA-EVSLERLETFRKMC 991  purple urchin
ADY40085      955 iqnssqlegiptRVAHQLHDAFQIRSANAQLMKVAFDE-EVSSEKAEEFLQTL 1006 pig roundworm
Q9TXP3        876 li-----ptqliEKGVKIEHIISIRSSCASSIIIAFDEdEINNMAIEKFLEVI 923  Caenorhabditis elegans
EFX89301      970 ----------lgHLDQWLQEGLQLRSNTFQMLKVAFDE-EVNLDSVEQLRKYI 1011 common water flea
Q9VGH9       1006 ----------laHLDQTLTEGLQLRSSSFQLIKVAFDP-EVTPEQIESFRKIL 1047 fruit fly
XP_002434049 1001 ----------lqQLEQVLPEGLQLRSNTFQLMRVAFED-EVTSESIEVFRKGL 1042 black-legged tick
XP_002591083 1323 ----------lsHINEWLSEGLQLRACTFQLVKLAFDE-EVTSEDIETFRKLI 1364 Florida lancelet
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