3PZD


Conserved Protein Domain Family
FERM_C_MyoX

?
cd13202: FERM_C_MyoX 
Click on image for an interactive view with Cn3D
FERM domain C-lobe of Myosin X (MyoX, Myo10)
MyoX, a MyTH-FERM myosin, is a molecular motor that has crucial functions in the transport and/or tethering of integrins in the actin-based extensions known as filopodia, microtubule binding, and in netrin-mediated axon guidance. It functions as a dimer. MyoX walks on bundles of actin, rather than single filaments, unlike the other unconventional myosins. MyoX is present in organisms ranging from humans to choanoflagellates, but not in Drosophila and Caenorhabditis elegans.MyoX consists of a N-terminal motor/head region, a neck made of 3 IQ motifs, and a tail consisting of a coiled-coil domain, a PEST region, 3 PH domains, a myosin tail homology 4 (MyTH4), and a FERM domain at its very C-terminus. The MyoX FERM domain binds to the NPXY motif of several beta-integrins, a key family of cell surface receptors that are involved in cell adhesion and migration. In addition the FERM domain binds to the cytoplasmic domains of the netrin receptors DCC (deleted in colorectal cancer) and neogenin. The FERM domain also forms a supramodule with its MyTH4 domain which binds to the negatively charged E-hook region in the tails of alpha- and beta-tubulin forming a proposed motorized link between actin filaments and microtubules. The FERM domain has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
?
PSSM-Id: 270023
Aligned: 9 rows
Threshold Bit Score: 145.995
Created: 13-Dec-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
peptide bindingputative actin
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide binding site [polypeptide binding site]
Evidence:
  • Structure:3PZD; Human Myosin X FERM domain binds DCC P3 domain , contacts at 4A
  • Comment:DCC P3 forms a single alpha-helix and binds to the alphabeta-groove formed by beta5 and alpha1 of the MyoX FERM F3 lobe

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                      ## ######     #                 ## 
3PZD_A        418 GSTLFDVEC---KEGGFPQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAPLANTYKIVVD--ERELLFETsEVVD 492  human
CAG09308     1843 GSTLFDVEC---KEGGFPHDLWLSVSAENVSVYKRGEPKPLETFPYEHIIFFGAPQPCTYKITVD--EREMFFETpQVGE 1917 spotted green...
NP_001086419 1945 GPTLFDVEY---KEGGFPNDLWLGVSAENVSVYKRGDAKPLETFQYEHIIFFGAPQPNTFKITVD--DRELFFETtQVGE 2019 African clawe...
XP_001636848 1574 GSTLFEVDT---KDPGLPPELWIGVSFNGVSIYKRGDTRPQCSYTYENILSFGAPQANIFKVVVDg-RDPMIFETgQVIE 1649 starlet sea a...
XP_002591928 1891 GATLFDVEC---KDRQHPVDLWLAVSVDEIALYKRGEERPLASYAYDSILSFGAPVPNTYKIVVEd-KEPMMFETsQVVE 1966 Florida lancelet
XP_002737244 1435 GATIFNVVG---KEGIFLGELWLAISSKMIAFYRRGDTKPIDEFTYEKILSFGAPLDNEYRIVVEghKTPFIFETtYVFE 1511 Saccoglossus ...
EGD76052     1765 GCNLFEVVQt--TKKEWPKELWLAISLEGVGIFPRNQSQRLAFFKYETILSFGAPQANQYKILVDggPGAMVFETnMVLE 1842 Salpingoeca s...
XP_700015     642 GCTLYEVDFyisSTGSFSQKLWLGVAASCVTLYRQGEAEALESLPITQICSYGVSDSNTFRITAG--DRDLLFETtKLTE 719  zebrafish
XP_003391049  615 GFSFFEVEYn-tPDQRFPKNLLFGVGARGVSFYRNGESSPMKFYPYEIITSFGAPVQNVYLLVVEa-QNPISIETnEVVE 692  Amphimedon qu...
Feature 1          ## ##  ##    
3PZD_A        493 VAKLMKAYISMIVK 506  human
CAG09308     1918 ITKIMKAYINMIVK 1931 spotted green pufferfish
NP_001086419 2020 ITKIMRAYINMIVK 2033 African clawed frog
XP_001636848 1650 IAKLMKAYINEIVR 1663 starlet sea anemone
XP_002591928 1967 IAKLMKAYINSLVK 1980 Florida lancelet
XP_002737244 1512 IAKLMKSYINEIVK 1525 Saccoglossus kowalevskii
EGD76052     1843 IAKLMKEYIKEIVH 1856 Salpingoeca sp. ATCC50818
XP_700015     720 IMQLMNAYFSATRR 733  zebrafish
XP_003391049  693 IAKLMKAYISSISV 706  Amphimedon queenslandica

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap