4DXA


Conserved Protein Domain Family
FERM_C_CCM1

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cd13197: FERM_C_CCM1 
Click on image for an interactive view with Cn3D
FERM domain C-lobe of Cerebral cavernous malformation 1
CCM1 (also called KRIT-1/Krev interaction trapped 1;ankyrin repeat-containing protein Krit1; CAM), a Rap1-binding protein, is expressed in endothelial cells where it is present in cell-cell junctions and associated with junctional proteins. Together with CCM2/MGC4607 and CCM3/PDCD10, KRIT1 constitutes a set of proteins, mutations of which are found in cerebral cavernous malformations which are characterized by cerebral hemorrhages and vascular malformations in the central nervous system. KRIT-1 possesses four ankyrin repeats, a FERM domain, and multiple NPXY sequences, one of which is essential for integrin cytoplasmic domain-associated protein-1alpha (ICAP1alpha) binding and all of which mediate binding of CCM2. KRIT-1 localization is mediated by its FERM domain. The FERM domain has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 270018
Aligned: 5 rows
Threshold Bit Score: 173.956
Created: 12-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actinputativeputative
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site 2 [polypeptide binding site]
Evidence:
  • Comment:ERM and merlin proteins might utilize interaction of the second masking motif with the FERM domain to compete with and suppress the binding of this region to actin

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
4DXA_B       222 GAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKALLISLKY-GCFMWQLGDTDTCFQIHSMENKMSFIVHTKQ 300 human
NP_001026144 637 GAAFFTGQIFTKASSSSHKVIKVYVGVNVKGLHLLNMETKALLLSLKY-GCFMWQLGDGDTCFQIHSLENKMSFIVHTKQ 715 chicken
NP_001121439 636 GAAFFTGQIYTKGSSSSHKVIRVYVGVNIKGLHLLNLETKALLISLKF-GCFMWQLGDADTCFQIHSIGNKMSFIVHTKQ 714 western clawed ...
F1REV3       633 GAAFFTGQVFTKASSSTHKVIRVYVGVNTKGLHLMNMETKVLHLSLEY-GTFMWQLGQADQYVQIHSLENKKNFVVHTKQ 711 zebrafish
EGV95702     636 GAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKDAATVDMVsGKPMCVESFSDYPPLGRFAVRDMLWVSSKLW 715 Chinese hamster
Feature 1                ############ 
4DXA_B       301 AGLVVKLLMKLNGQLMPTERN 321 human
NP_001026144 716 AGLIVKLLMKLNGQLMPSERN 736 chicken
NP_001121439 715 AGLVVKLLMKLSGQFTPNDRN 735 western clawed frog
F1REV3       712 AGLIVKLLMKLSGQIAPNDRA 732 zebrafish
EGV95702     716 TRRLLERAKSPSRPRKLRRLN 736 Chinese hamster

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