2AEH,4EKU


Conserved Protein Domain Family
FERM_C_FAK1

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cd13190: FERM_C_FAK1 
Click on image for an interactive view with Cn3D
FERM domain C-lobe of Focal Adhesion Kinase 1 and 2
FAK1 (also called FRNK/Focal adhesion kinase-related nonkinase; p125FAK/pp125FAK;PTK2/Protein-tyrosine kinase 2 protein tyrosine kinase 2 (PTK2) is a non-receptor tyrosine kinase that localizes to focal adhesions in adherent cells. It has been implicated in diverse cellular roles including cell locomotion, mitogen response and cell survival. The N-terminal region of FAK1 contains a FERM domain, a linker, a kinase domain, and a C-terminal FRNK (FAK-related-non-kinase) domain. Three subdomains of FERM: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3), form a cloverleaf fold, similar to those of known FERM structures despite the low sequence conservation. The C-lobe/F3 within the FERM domain is part of the PH domain family. The phosphoinositide-binding site found in ERM family proteins is not present in the FERM domain of FAK1. The adjacent Src SH3 and SH2 binding sites in the linker of FAK1 associates with the F3 and F1 lobes and are thought to be involved in regulation. The FERM domain of FAK1 can inhibit enzymatic activity and repress FAK signaling. In an inactive state of FAK1, the FERM domain is thought to interact with the catalytic domain of FAK1 to repress its activity. Upon activation this interaction is disrupted and its kinase activity restored. The FRNK domain is thought to function as a negative regulator of kinase activity. The C-lobe/F3 is the third structural domain within the FERM domain. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs) , the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 270011
Aligned: 28 rows
Threshold Bit Score: 119.269
Created: 5-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actinputativeputative
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site 2 [polypeptide binding site]
Evidence:
  • Comment:ERM and merlin proteins might utilize interaction of the second masking motif with the FERM domain to compete with and suppress the binding of this region to actin

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
2AEH_A        224 DKECFKCALGSSWIISVELAIGPe-EGISYLTDKGAn---PTHLADFNQVQTIQYSNsed--------------kdRKGM 285  chicken
NP_740842     157 DVELFKASLGAGWTKPVELVVGPh-TGLSYRLNERCd---SSRLLELRTIAEITIRKmen--------------gsEKTL 218  nematode
AAW21807      243 DLEVYKCSLGSVWSIAVDVVVGPn-DGISYRPEQGSk---INRMAEFFQISKIQSSKvga--------------mpGKAS 304  green hydra
EFN66133      342 DQERFICALGSSWSIPVELVIGPd-LGISYMAHRGGt--vPTRMAEFSQIQSIQTLVsdc-------------kehAKAC 405  Camponotus fl...
XP_003137310  227 DTEIFKASLGVVWKNPLDVMVGMa-VGISCDADGRGr--gPILLAKLEYIINLKLLKlde--------------ksEKTV 289  Loa loa
CBY23293      241 EREYYDVSLHESFPIATTLMVGPnaCQISYGSPTGRd---LTLLARFEHVVRIEPIT-------------------EPYV 298  Oikopleura di...
EFX90261      340 DREKFQCDLGTGWSIPVELIIGPd-VGISYTASQAGs--qLILVADFSHVSQVETLMsadceshnnvqrivggvssNKAV 416  common water ...
ADY42570      119 DVEIFRASLGAGWTTPIDIIVGMr-VGISYSTELRCa---PTPITQLRNIVDISVRKlee--------------tsEKAV 180  pig roundworm
XP_001951286  372 DEEQFKCSIGSGWTIPVDLVIGPr-HGISYINNQGSa---PTKMADFAHIENIQTLVsec-------------ethRKTL 434  pea aphid
EHJ74301      469 DRETFTGALGTGWAIPVELAIGPd-IDISYVSHKAGepptYTKIASFSDIIAVQTLKsnctqqs-----qsqtsscGKAA 542  monarch butte...
Feature 1                                  ############            
2AEH_A        286 LQLKIAGaPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRPQK 334  chicken
NP_740842     219 MQLNLSGaAKPVLITLSTEELSQSLAHLLDGYQMLYNQRDSVFKLKGIE 267  nematode
AAW21807      305 LTIQVEGsKEPLVFMLDSINKAIELADLIDGYCHIINGQLSKSLIVKRV 353  green hydra
EFN66133      406 IKLRVAGaAETLSITCSSLDQAESLADLIDGYCRLVTGSNTSLWNRKDA 454  Camponotus floridanus
XP_003137310  290 VNLKITGsSQQLSITLPTWSIAESLAHLINGYNMLLSQQGSIWTPSELL 338  Loa loa
CBY23293      299 LLLYVEAsSDPLYINCSSEDELENLADLIDGYVRGSRDVPDGSVIGASR 347  Oikopleura dioica
EFX90261      417 VQIKVAGsQEPLLITCSSIEMAENIADLVDRYCRLVNGTNLSLWNKRDL 465  common water flea
ADY42570      181 VQLKLTGsSQPMSITVPNSLIAESFAHLLDGYQMLLSQQGSVWTPRELM 229  pig roundworm
XP_001951286  435 VQLQVTDsADPLVLSCSTLEHMYSLANLIDGYCQLARKTNISLWNKKDS 483  pea aphid
EHJ74301      543 LQLRVKGaAETLTITCSSVEAAESLADLVDGYCRLVTDSQTSLWNRTTE 591  monarch butterfly

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