Conserved Protein Domain Family
FERM_C_FRMD1_FRMD6

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cd13185: FERM_C_FRMD1_FRMD6 
FERM domain C-lobe of FERM domain containing 1 and 6 proteins
FRMD6 (also called willin and hEx/human expanded) is localized throughout the cytoplasm or along the plasma membrane. The Drosophilla protein Ex is a regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and is tumor suppression by restricting proliferation and promoting apoptosis. Surprisingly, hEx is thought to function independently of the Hippo pathway. Instead it is hypothesized that hEx inhibits progression through the S phase of the cell cycle by upregulating p21(Cip1) and downregulating Cyclin A. It is also implicated in the progression of Alzheimer disease. Not much is known about FRMD1 to date. Both FRMD1 and FRMD6 contains a single FERM domain which has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe is a member of the PH superfamily. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs) , the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 270006
Aligned: 17 rows
Threshold Bit Score: 137.439
Created: 7-Dec-2011
Updated: 22-Oct-2014
Structure
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Aligned Rows:
 
putative actinputativeputative
Feature 1:putative actin binding site 2 [polypeptide binding site]
Evidence:
  • Comment:ERM and merlin proteins might utilize interaction of the second masking motif with the FERM domain to compete with and suppress the binding of this region to actin

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
Q96NE9        227 DDVAVHYYRLYKDKREi---------------------------------------eASLTLGLTMRGIQIFQNld---- 263  human
EFX80952      161 THYGLHLYRLRSSKKSddhnqqqlqlrtpldrtasqrpcsanenptiqqqlhdqphtGTVWLGICGRGIDIYEEeds--- 237  common water ...
XP_001946205  229 VVQKSHLYRLRLNKSQpkqtqg-----------------------------camsicNCVFLAISINGVQMYHEsl---- 275  pea aphid
XP_002427896  236 LNHNVHLYKLKSNKKLhd-------------------------------------dqDVVWLAISAQGIQICEDtl---- 274  human body louse
XP_002590857  224 EDVAMHIYRVKKKKKEn---------------------------------------pASTLLGVCQRGIQVYQIsd---- 260  Florida lancelet
NP_506085     257 FALNCHLYGLRRHKMDn---------------------------------------tDNAVLGINAKGIEMCDIged--- 294  nematode
XP_002125027   25 EDVPVHYYKLYKTKKEt---------------------------------------tPSVVLGIYHQGIRIHHVapqrdd 65   Ciona intesti...
XP_426484     219 DDVAVHYYRLYKDKREv---------------------------------------dASLTLGLTTRGIQIFQNld---- 255  chicken
ADY41185      281 FALNCHLYGLRRHKMDt---------------------------------------vDNAIIGITPKGIDMSDVssd--- 318  pig roundworm
EGW13512      532 DELEGDLVAVLEEKKEd---------------------------------------gPTMLLGLTLKGVHIYREad---- 568  Chinese hamster
Feature 1                                                           ############          
Q96NE9        264 eeKQLLYDFPWTNVGKLVFVGKKFEILPDglpsARKLIYYTGCPmRSRHLLQLLSNSHRLYMNLQPVLRHIR 335  human
EFX80952      238 ftKTVRATFQWPNIGKLCFERKKFEIRAVgcpeSRKFTYYTSSDdKSKHLLYLCRVTHQFSMAMQPKLAELR 309  common water flea
XP_001946205  276 -sQALTGLFLWNTIVKLCFDRKKFELRPSn---IDRLVYYTNSDeKSKRILALCRETHQFSMTVHPRLLDAF 343  pea aphid
XP_002427896  275 fkKSLLATYSWDSIGKLCFDKKKFEINSSk---LEKMVYYTSSDeKSKHLLFLCRVSHQFSKVSDLIFCENI 343  human body louse
XP_002590857  261 deQNLQFSYSWNGLGRLKFKRKRIELQPDgapsFRKLVYYTDSYnRSKYLLELMKGTHQFHLRMKPRLDQIR 332  Florida lancelet
NP_506085     295 gdRIPLRSLSWSRVAKLSFNRKKMTIIGSd---GTKMSLYAQTEhKAKYLLELCKAVHQTLLVMSHLHATMA 363  nematode
XP_002125027   66 giHLLDFEFPWNKVGRLFFAAKRFEIYPEdlpaSRRLTYYTGSHtRSKYLLRLLRETHSLYMSLTPFVQHMR 137  Ciona intestinalis
XP_426484     256 eeKQLLYDFPWTNVGKLVFVGKKFEILPDglpsARKLIYYTGCPlRSRHLLQLLSSSHRLYMNLQPVLRQVR 327  chicken
ADY41185      319 geRIPLRSLRWGRMSKLCFDKRKLSITGMd---GACISLYAQSEqKARYLLEFCRALHQAIIAINNHYFLNP 387  pig roundworm
EGW13512      569 gaPQLLFDFPWSHISKVTFLGKKLEIQPEgllaTRKLRFYTGYAwRSHYLLQLLRTTHQLHLRLRPVLQRLQ 640  Chinese hamster

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