Conserved Protein Domain Family
PTB_LOC417372

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cd13168: PTB_LOC417372 
uncharacterized protein LOC417372 Phosphotyrosine-binding (PTB) PH-like fold
The function of LOC417372 and its related proteins are unknown to date. Members here contain a N-terminal RUN domain, followed by a PDZ domain, and a C-terminal PTB domain. The RUN domain is involved in Ras-like GTPase signaling. The PDZ domain (also called DHR/Dlg homologous region or GLGF after its conserved sequence motif) binds C-terminal polypeptides, internal (non-C-terminal) polypeptides, and lipids. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains. This cd is part of the Dab-like subgroup.
Statistics
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PSSM-Id: 269989
Aligned: 10 rows
Threshold Bit Score: 170.201
Created: 7-Nov-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putativeputative
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:Dab1 PTB has preference for unphosphorylated tyrosine within the NPxY motif
  • Comment:Phosphotyrosine peptide contains the Gly-Pro-(p)Tyr motif
  • Comment:Numb binds diverse peptide motifs
  • Citation:PMID 9846878
  • Comment:beta-amyloid precursor protein (betaAPP)
  • Citation:PMID 9321393
  • Comment:Alzheimer disease amyloid precursor protein (APP)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
XP_429506    295 LLYNLQYLGrigvgmfggkevlq--------kaipavleshvaprEVLFDVKETEILVQEKasp--------kvLFRHCy 358 chicken
XP_003378924 286 HRFIASYCGccevaegtvseqi-----------gigihdvsakcqQVKNIVLEINVTKAISslcd-----tgeiLFEHTf 349 Trichinella spi...
XP_002124133 354 GSYKVTYIGevltgedggvdqies------virqalnkrsdrtsfNVTITLTQIGVETGIGnhsq------vepLFNHKy 421 Ciona intestinalis
XP_002573307 241 NNLRSLYDGqpipvgvtkalmpdgriyprlrslleqhgyvnliadLERSGQGELGVTVWQLqrkdnkvsrseepLLRHSy 320 Schistosoma man...
XP_002613189 334 AEFNAKYVGqvstgrygdvaeiegav---ekaieqnkqqqitenkEVHVELTETEVIITDLktn--------keLSKHSy 402 Florida lancelet
XP_001341328 317 ILYAVDLLGkanigmyggkevlq--------haipvvleskqtrkEVLLDVKETHLTCIDKstk--------qeLFQHHf 380 zebrafish
XP_001639986 293 AAYPAVFYGkldvgtdgsvavie--------dsiievlnkampprDVELLLSEINITVVDKits--------kvLSVHSf 356 starlet sea ane...
XP_003702571 311 AGFSVKYCGsmyigtqgdvkqier-------ailqvlkseelksvPVKFECLEIGIRVTQDsdd--------kvICKQSy 375 alfalfa leafcut...
EFA08610     175 SGFKAAYLGcvsvgckgsvkqiee------alkfhlnkfeindrkPVSIEIGEINVKILLEtg---------eiLFKHSf 239 red flour beetle
GAA48199     302 SPGRLLYVGqcevgsnggvnminsa-----ilrvlmnrrkddwpiPVHMELGELGIAIWNMhprtgavdptqppIFQHSf 376 Clonorchis sine...
Feature 1          ######              #                             #   #        
XP_429506    359 paVSCVGRClk--tsNVFAFCVVAspgspkgstFDCLVFASSseq--eceEIIQRIAAGFKHTEW 419 chicken
XP_003378924 350 teIVSCGRRvd--hpKLFAYVVGDssya-lkkhYVCYVFKFAsde--evcTMMAEFSKGFNRMHW 409 Trichinella spiralis
XP_002124133 422 adISSCGKIvt--ddFHFCYIAGDtfct-lskqFVGYVFRAEtla--qsrAVLNGIYQGFKRTTW 481 Ciona intestinalis
XP_002573307 321 pqISSCGRRtd--gtNYFAYIAGEesct-tashFTCYVFESMdke--earRIISGLSMGFDRTHW 380 Schistosoma mansoni
XP_002613189 403 teISSCGRRsd--mtKYFAFIAGDtqcs-vsrnFTAFVFEAEsad--eskIILCSIAQGFGRTSW 462 Florida lancelet
XP_001341328 381 peISCVGRFgsqpdlTIFAFCVLDapqadkpagFCCVVLQAAncs--eceEIVNRIAAGFKHTEW 443 zebrafish
XP_001639986 357 teTSSCGRRnd--rkDLIAFVSGEttcs-laqrFYCYVFQIKdpevrtgfAVLSGSSRGLKSAEE 418 starlet sea anemone
XP_003702571 376 meISSCGRTkn--ipHYFAFIAGDtncn-lstkFEVYVFYSQneh--dvqTILQSLGQGFQRTHF 435 alfalfa leafcutting bee
EFA08610     240 mqISSCGSApn--lpNYVAYIAGEencd-tannFVCYIFYVHdvs--layTILQSIGQGFYRTHF 299 red flour beetle
GAA48199     377 pqISSCGRRtd--ntNYLAYIVGEepcs-iakrFRCFVFEAVdke--eakRLIHGIAQGFDRTHW 436 Clonorchis sinensis

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