2CKK


Conserved Protein Domain Family
KOW_KIN17

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cd13155: KOW_KIN17 
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KOW_Kin17 is a RNA-binding motif
KOW domain of the KIN17protein contributes to the RNA-binding properties of the whole protein. KOW domain is known as an RNA-binding motif that is shared so far among some families of ribosomal proteins, the essential bacterial transcriptional elongation factor NusG, the eukaryotic chromatin elongation factor Spt5, the higher eukaryotic KIN17 proteins and Mtr4. KIN17 is conserved from yeast to human that ubiquitously expressed at low levels in mammals tissue and have functions in DNA replication, DNA repair and cell cycle control.
Statistics
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PSSM-Id: 240519
Aligned: 46 rows
Threshold Bit Score: 65.2501
Created: 25-Jul-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2CKK_A        73 PGKRILVLNGGYRGNEGTLESINEKTFSATIVIETGplkgRRVeGIQYEDISKL 126 human
EDV28896     327 YGRHVMILKGKYRGLTAILESLDSDKYCVSIRLDEGsekgKTLhNMAYEAVSKI 380 Trichoplax adhaerens
EFN55929     372 PGGTVLVVSGPHRGARGTLVGIDTKKFKAEVKLRGGaqdgRSV-WLEYEDFSRW 424 Chlorella variabilis
XP_002500246 351 VGGAVVVLKGEHRGLTGKMDGLETDKYKAVVTLREGpgkgTTM-RFDYEDISKL 403 Micromonas sp. RCC299
EFW41531     375 LDQSVYIVNGQYRGGIARMLELIPDKYRARVRIESGsnsgRTI-EADYEDVCKF 427 Capsaspora owczarzaki ATCC 30864
EIE27664     335 AGGSVVVVRGAQRGARAEMLEIDVDKYRAQVQLKSGdgkgEKV-WFDYEDICKV 387 Coccomyxa sp. C-169
EGD79890     116 VGGHVLILHGPHANCLGKLKDIDYDKFSADIKVLEGsgkgTRV-MLPYEHFSKF 168 Salpingoeca sp. ATCC50818
EJK63123     363 VGEKVRVVNGRHRGAKGRVESLDKRECRGEVRLSGGeeigLVV-ELDYEDFCKV 415 Thalassiosira oceanica
ACO11746     341 PGRNVLVLNGLYRGEVGVLKSILVEEFSALIELKEDg---SVV-KIPYEHFSKL 390 Caligus rogercresseyi
XP_002294556 370 TGEKVRILNGKYRGKKARLEKLDKTKYRAELRLVDDd---RIV-ELDYEDFSKL 419 Thalassiosira pseudonana CCMP1335
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