Conserved Protein Domain Family
MATE_like_11

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cd13126: MATE_like_11 
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins
This family might function as a translocase for lipopolysaccharides, such as O-antigen. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Statistics
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PSSM-Id: 240531
Aligned: 20 rows
Threshold Bit Score: 199.451
Created: 14-Sep-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q3K9H6         1 MIFRLLLRGGALGAKFLLVLAITHYLGYEALGFYGVVVAASLIASKFYSVG-FSSEINRLIS---VGGSSRRVVDKVLLL 76  Pseudomonas flu...
YP_001543536  25 GFWLVASMLLVNLGNYGFAIVLGRGLGPQVYAEVNLIVTCFALATLLSSMF-QIYAANASVRp-nNHATLRRLRQIAWGI 102 Herpetosiphon a...
YP_001544958  25 GLWLFISMMLVNAGNYGFNVLVGRWLGPSAYAEINLMITLFLIATFITSGLqMSAARAIVGSnnqAILTMLRRVAWVCGG 104 Herpetosiphon a...
YP_003407536  27 AGWSTSDQVVSSLSSFALGVLVAREVSAAEFGAFALSFTVYGYLVIVTRVL-VSQPLTVRFSd-aAPSAARQAARQSTGA 104 Geodermatophilu...
YP_001360312  28 GLWNIADQVVSSGNNFLVQLVIAQFASSGEFGAFAISFAVFSVAIGLFRAG-ATSPVAIRLAs-aGDAEFRRGASAAVGT 105 Kineococcus rad...
YP_003380609  13 AGWSLADQGLSSLSNLAVGVLVARSSSVADFGVYALAFGGYTIALNVSRAV-ATEPLGVRYSg-qRTPQWHKAVRASTAT 90  Kribbella flavi...
YP_004331945  45 VSWGLGDQAVSSLTNFLVGVYVARSLDATSFGVFSLVWVTYGVLLNVSRGL-GTDPLTVRHSg-ePGPEWREAVGRSSGT 122 Pseudonocardia ...
ZP_09739591   14 LSWGLADQAVSSLTNFAVGAFVARTLGVTAFGAFSLAWVTYGLLINVSRGL-GTDPLMVRFSg-vDARSWSGAVGRAAGT 91  Saccharomonospo...
YP_003762786  24 LSWGLGDQAVSSLTNFAVGLYVARSLGTFAFGIFSLAWVTYGVVLNISRGL-ATDPLMVRFSa-vPEDRWRSGVASASGT 101 Amycolatopsis m...
AAN04246      29 LSWGLADQAASSLSNFAVGVYVARSLGLTAFGVFSLAWVTYGVVLSVSRGV-ATDPLVVRFSa-vAEASWRQAVARSTGT 106 Streptomyces sp...
Q3K9H6        77 YLAVGLALSvlTVVIYSLFqsvEATTALIACVTLVLLTEHLSFEINSfvfSAQKATAGALLFFIKTGLWALLAVG---GM 153 Pseudomonas flu...
YP_001543536 103 GAASAGVCTg-LAAFWQSK---FHTSPTPLLVLGLGLGSYYALGVER---GIMQSQAAFGRLALNALLEMLIRLIg-aMI 174 Herpetosiphon a...
YP_001544958 105 LSLLGLGLF--AAFWQTLF---HTASASPFIILGVGLACYYALGVER---GIAQGCAHFGRLAWNFQIEMAVRLMg-aCV 175 Herpetosiphon a...
YP_003407536 105 AIVVGLPPAaaLALTGVLL---GGTVGPTLVLTAVLLPGLLLQDAWR---MVFFAAGRPRAAAAIDSAWAVVQVClmlML 178 Geodermatophilu...
YP_001360312 106 TVIAGVLASl-VIVAGALVlplSRTIEHSLLALAVVLPGLLVQDAWR---QVLFARLRPAAATLLDAVWGLLQVAavvAL 181 Kineococcus rad...
YP_003380609  91 AFLAGVAAMlvGLLIAAFP---GIPSAGVLVAFAVTMPGLLLQDAWR---FAFFVVGDGRRAFVNDLVWLVAMAVlfaGL 164 Kribbella flavi...
YP_004331945 123 ALVLGIAGGlvGVVVGLLI---GGSLGNAFVGLGIVLPALLLQDSWR---FAFFAVGRGQYAFVNDLVWAAALVPg--MV 194 Pseudonocardia ...
ZP_09739591   92 ALAVGAIAGaaSLLIGVAI---GGIVGWGFIALGVVLPALLLQDSWR---FAFFASGHGRKAVANDLVWAAALVPa--MA 163 Saccharomonospo...
YP_003762786 102 AIGVGCVTGvvSLLAGLAA---GGPLGNAFVALAVVLPGLLLQDAWR---FAFFARGAGKKAFVNDCVWGVAMLPa--LY 173 Amycolatopsis m...
AAN04246     107 SLVVGAGVGtlCLALWPLL---GGSVGAAFACLGVVLPGLLLQDAWR---YSFFAAGVGRKAFVNDVVWGVALIPa--MV 178 Streptomyces sp...
Q3K9H6       154 ALGWVSAIASVLWLWVIANVLVIVAGYLIVVnvhrGREEGTLATAAVwkaglpFYLGTGLIALSQYAERF--LIIDLEPY 231 Pseudomonas flu...
YP_001543536 175 VVSLSLGVTEASVALTSSLLGAWWFSRSKPTv---TQVDGVSHQTPS------LWPIGLCLAGQGLLLNSdiVLVTLWFS 245 Herpetosiphon a...
YP_001544958 176 FVGLGMGVAGATIALSSSIVIAWLDSRRSYAt---VEQHRTNNSIQLq----mMLPIIIHLLGQVLINNSdvLLVKAWFP 248 Herpetosiphon a...
YP_003407536 179 STTDQGSAVAYLGVWGLSGWLAALLGALLAGl--vPAPRATWQWLKAhwd-lsRYFVTEYVLINGSTQLMlvLVAATGGL 255 Geodermatophilu...
YP_001360312 182 LLADQHSPVAYILGWGGAAFAASFVGVALSKh--wPAPRLAWKWLREqws-ltRYLVPEFVVLQGGNQFAtiLVALVLGE 258 Kineococcus rad...
YP_003380609 165 YATGTASAFSLTLCWGLGAVVAAIAGRFQAGl--lPRLQLVRDWLKEhrd-ltPKYVGEMLAVSGTIQVYmlGITAVASI 241 Kribbella flavi...
YP_004331945 195 LASHHHTVSGFVLAWGGSSAVAAIVGAAQARi--lPRPAAFRTWVRLhrd-lgYRYLVENVSTSGASQLRayGLGAIAGL 271 Pseudonocardia ...
ZP_09739591  164 IAATHQSVAAFLLAWGVSGAVAAAFGWLQSGv--rPRVSSSLAWLREqrd-lgPRFLVENVSNSGGSQLRlyGLGAIAGL 240 Saccharomonospo...
YP_003762786 174 VAAQIHTVVAFVLAWGLSGAVAALYGGFQTGi--lPHPREMAGWLRTqrd-lsVRYLVENVSNSGASQLRayGLGAIAGI 250 Amycolatopsis m...
AAN04246     179 VAAQVGTVPAFVLAWGGSAAVAGAYGWLQSGi--rPRPAGARPWIRDhrd-lgLRYLVENTCVSGASQLRayGLGAIVGV 255 Streptomyces sp...
Q3K9H6       232 ASLGKYVYAWSAANTLQALs-YAVVAvigIPLLAKRYQAdQQPFTVRQLFVNKWVARSLAVSAAVAVGIYlffNVVLDYV 310 Pseudomonas flu...
YP_001543536 246 SQIAGQYAALALIGRIGLFvsSTVATl--FFAKLLRADQ-STIQQREAFWQSLGITTIIGIVFSLACWAMp--DLIVQAL 320 Herpetosiphon a...
YP_001544958 249 AMIAGQYAALALIGRVVFFatATLGTi--LFPRVLRSTQ-HSEQQRLFWQSIMITVAIAGLITLLCKIIP---QLILGWL 322 Herpetosiphon a...
YP_003407536 256 AVAGALRGAQVLTGPVGILvtSGMAFa--IPELARRPWT-VGRRLIRAGVGISGTVVVLATVWGALLLVLp--EEVGRQL 330 Geodermatophilu...
YP_001360312 259 AAAGSMRGGNLLTAPVAILg-AGISSf-aVPEFARRKHQlTSRQWYLGAAGLGGIVLVAGVVWGSMFLLLp--DAFGETI 334 Kineococcus rad...
YP_003380609 242 VAVSGIRGAQVLLGPVNVLn-QGIRAi-aVPEASRALKH-SYRRLWRVGLVISGGVGAGALAWGAIFLLLp-eAVGRELL 317 Kribbella flavi...
YP_004331945 272 AAVGTVRGAELLIGPFLAVl-MGLSLv-sVPEAARILRR-SPRRLPQFCLVLGSGQALAAMLWGCVLLFVm-pASIGHYF 347 Pseudonocardia ...
ZP_09739591  241 ADVGAVRGVELLLGPFFAVl-MGLSLv-tVAEAARVRRR-SPHRLRQFCLFIGGSQATAALAWGLGLLLLl-pDPVGEFL 316 Saccharomonospo...
YP_003762786 251 TAVGAVRGAEQLLGPFLALl-MGLSLv-tVAEGARVLQR-APHRLKHFCVILGGGQAGAALCWGLGLLLLv-pDRAGRWV 326 Amycolatopsis m...
AAN04246     256 GAVGVVRGAELLQGPFTAVl-MGLTLv-tVAEAARMLRQ-APHRLGRFCLLLGGGQAVAALLWGGVLLLMp--DRAGELV 330 Streptomyces sp...
Q3K9H6       311 ATSVPRPDNGILGVLIFSFALraigdivwGGLIASKNSRVSLASAAICLLVSVPVSYLLIk-------HYSIYGAAWGNV 383 Pseudomonas flu...
YP_001543536 321 FGSAYLPIVSVLWRYAAIASGy-------ALVNLLVSYQLAQQRLAGVWLILGAGSMQIValglfhqtINHVLGVQAGIM 393 Herpetosiphon a...
YP_001544958 323 FGEAYLPIADFLWLYAVATSCy-------AIANISITYQLAQDRSFGAWIALLAGSIQIGvmswfnqsIHQILYSQVGVM 395 Herpetosiphon a...
YP_003407536 331 MGDTWTGVDAILVPTVLGLVMs-------ASGLGPTCGILAAQRPKVLFWLQIIAAPAYLigglvgvlTGGAFGAAVGIA 403 Geodermatophilu...
YP_001360312 335 LRDSWAGTQVVLLALIVGQAGt-------SMAGGPTTMLYAMGRAKDTLRVHVVLAALVVvlpvtfahLWGLQGAAWAIA 407 Kineococcus rad...
YP_003380609 318 GPAVWAEASAVMIPVILLQALg-------ASNSGAFAILRALAAAGRGLRVRLISSVVLItagitgaaLGGPLGAAWGLA 390 Kribbella flavi...
YP_004331945 348 LGDVWDESSRLIVPITASVMSa-------SFLTGAAAGLRALGAARRSLRAQLVAAVLYLggglagaaVGGAYGSAWGVV 420 Pseudonocardia ...
ZP_09739591  317 LGSVWGPASALILPATLGVVGa-------SFFTGAAAGLRALGAAKRSMSSQLVASACYVtgglvgaaLNGALGSAWGVA 389 Saccharomonospo...
YP_003762786 327 MGSVWDSSSPLILPVTLAVVGa-------SFATGAAAGLRALGAAKRSLRSQLIASLFYVtfgitgafLGGAAGSAWGVA 399 Amycolatopsis m...
AAN04246     331 LGDVWPAAKELIVPATLSVAGa-------GVGTGAAAGLRALGAARLSLRCQIFAFVWYVglgiggagLGGTVGSAWGAA 403 Streptomyces sp...
Q3K9H6       384 FAIIVQLGVIALLTRATRAK 403 Pseudomonas fluorescens Pf0-1
YP_001543536 394 LALLVLVGLSEWLSCQKNRA 413 Herpetosiphon aurantiacus DSM 785
YP_001544958 396 LGLLLVLMLYEFYRARARQK 415 Herpetosiphon aurantiacus ATCC 23779
YP_003407536 404 LAHTLGAGFAWIRLVVVARQ 423 Geodermatophilus obscurus DSM 43160
YP_001360312 408 VAFWAVVPFWWISLRKAIAA 427 Kineococcus radiotolerans SRS30216
YP_003380609 391 SAAFCTLLLWWYEAHQALTT 410 Kribbella flavida DSM 17836
YP_004331945 421 LAQLAGAGVAWWQLRDGLRD 440 Pseudonocardia dioxanivorans CB1190
ZP_09739591  390 AANVLGAAVWLVQLHLALRE 409 Saccharomonospora marina XMU15
YP_003762786 400 TATLGGSVVWWLQLRIGLRE 419 Amycolatopsis mediterranei U32
AAN04246     404 AASVCGSAAWWLHLRIALRE 423 Streptomyces sp. 139
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