3K8L,3K8K


Conserved Protein Domain Family
CBM58_SusG

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cd12961: CBM58_SusG 
Click on image for an interactive view with Cn3D
Carbohydrate-binding module 58 from Bacteroides thetaiotaomicron SusG and similar CBMs.
This group includes the starch-specific CBM (carbohydrate-binding module) of SusG, a cell surface lipoprotein within the Sus (Starch-utilization system) system of the Human gut symbiont Bacteroides thetaiotaomicron. It represents the CBM58 class of CBMs in the carbohydrate active enzymes (CAZy) database. SusG is an alpha-amylase, and is essential for growth on high molecular weight starch. SusG-CBM58 binds maltooligosaccharide distal to, and on the opposite side of, the amylase catalytic site; it is one of two starch-binding sites in SusG, the other being adjacent to the active site. SusG-CBM58 is required for efficient degradation of insoluble starch by the purified enzyme. Its starch-binding site contains an arc of aromatic amino acids for hydrophobic stacking with glucose, and hydrogen-bonding acceptors and donors for interacting with the O-2 and O-3 of glucose. It may play a role in product exchange with other Sus components.
Statistics
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PSSM-Id: 240569
Aligned: 4 rows
Threshold Bit Score: 183.642
Created: 1-Feb-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
starch binding
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:starch binding site [chemical binding site]
Evidence:
  • Structure:3K8L: CBM58 domain of Bacteroides thetaiotaomicron SusG (D498n mutant) binds maltopentaose; contacts at 4A
  • Comment:The site contains an arc of aromatic amino acids (Trp residues) for hydrophobic stacking with glucose.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                            # ###                      #  #        # 
3K8L_A    199 LKFTLDWsnapsPILVVStg-tkADEDNPDTgtdnAKYLYYGEDICKKFYDkgnNIYELTVdFEStWGLLIRTSNASfWP 277 Bacteroides thetai...
3K8K_A    199 LKFTLDWsnapsPILVVStg-tkADEDNPDTgtdnAKYLYYGEDICKKFYDkgnNIYELTVdFEStWGLLIRTSNASfWP 277 Bacteroides thetai...
EEB25284  222 YTFSLDWskasqPTVTVTra-ekADADNPDPgtngAKYLYFGEGICKKFYDkgnNHYELTTdFVSsWGFLIRTSNDPsWP 300 Bacteroides sp. 4_...
CBK62786  302 FKFVLDWtnadsPTVTVTetadaADADNTQGga-dDKYLYFGNGTSKRFYArggNSYELTLdFDSdWGFLVRTSTTS-WA 379 Alistipes shahii W...
Feature 1        #                           # 
3K8L_A    278 SGTKYGASSSSEKLALNKDFKLTna--gNPANI 308 Bacteroides thetaiotaomicron
3K8K_A    278 SGTKYGASSSSEKLALNKDFKLTna--gNPANI 308 Bacteroides thetaiotaomicron
EEB25284  301 AGTKYGATSASHKVTLGTAFTLDn---kTAADI 330 Bacteroides sp. 4_3_47FAA
CBK62786  380 AGTKYGAPDNRTIIRFGEPFTLMsnrsaDPANV 412 Alistipes shahii WAL 8301

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