Conserved Protein Domain Family
LEM_LEMD2

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cd12941: LEM_LEMD2 
LEM (Lap2/Emerin/Man1) domain found in LEM domain-containing protein 2 (LEM2)
This CD corresponds to the LEM domain that is responsible for the interaction with chromatin protein barrier-to-autointegration factor (BAF). LEM2, also termed LEMD2, is a novel Man1-related ubiquitously expressed inner nuclear membrane protein required for normal nuclear envelope morphology. Association with lamin A is required for its proper nuclear envelope localization. It also binds to lamin C and plays an important role in the organization of lamin A/C complexes. LEM2 contains an N-terminal LEM domain, two putative transmembrane domains and a MAN1-Src1p C-terminal (MSC) domain, but lacks the Man1-specific C-terminal RNA recognition motif (RRM).
Statistics
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PSSM-Id: 240588
Aligned: 3 rows
Threshold Bit Score: 76.099
Created: 15-Feb-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative polypeptide substrate binding site [polypeptide binding site]
Evidence:
  • Comment:Based on structure evidence that human emerin binds barrier-to-autointegration factor (BAF).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       ##           ###### ##  ## ##       
Q8NC56      4 LSDLELRRELQALGFQPGPITDTTRDVYRNKLRRLRGE 41  human
XP_418032   4 LTDAELRKELLALGYRPGPITETTRKVYIKKLSCLRAE 41  chicken
CCD77250    5 LRDDELRRELKTLGFDPGPITATTRSVYVKKLEKLQKE 42  Schistosoma mansoni

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