Conserved Protein Domain Family
VKOR_3

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cd12920: VKOR_3 
Vitamin K epoxide reductase family in bacteria
This family includes vitamin K epoxide reductase (VKOR) present in proteobacteria and spirochetes. VKOR (also named VKORC1) is an integral membrane protein that catalyzes the reduction of vitamin K 2,3-epoxide and vitamin K to vitamin K hydroquinone, an essential co-factor subsequently used in the gamma-carboxylation of glutamic acid residues in blood coagulation enzymes. All homologs of VKOR contain an active site CXXC motif, which is switched between reduced and disulfide-bonded states during the reaction cycle. In some bacterial homologs, the VKOR domain is fused with domains of the thioredoxin family of oxidoreductases which may function as redox partners in initiating the reduction cascade.
Statistics
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PSSM-Id: 240603
Aligned: 15 rows
Threshold Bit Score: 81.2016
Created: 25-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activeredox center
Feature 1:putative active site [active site]
Evidence:
  • Comment:four cysteines and one serine or threonine are inferred to be the active center

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                         #               #     #                     
ABW66329   20 IPVFVIALIGFGDSIYLAVSHYRnyvd---mgyqSFCAIsr--------slNCDTVSQSPYSif------lnVPVPVWGI 82  Desulfococcus oleo...
ABS27036   38 LVALAAALVGATFAALSTGDFMQhldr---qvhaIHCSFlpgaak-dlaasGCRTVMMSPYSsffreslwggVPVSLWAL 113 Anaeromyxobacter s...
CBW27650   16 VILGVLAVAMIAVSIYLTNHYFGvkfptsisdssTMCNFns--------ffNCDTTTNSPASni------agVPISLFGA 81  Bacteriovorax mari...
ACG71777   29 LAILVLALAGAGLAAELTLLHGRahag----gasSFCAIse--------rvNCDKVALSAWSsl------lgVPLAAWGL 90  Anaeromyxobacter s...
ADW18229   20 IPVIFFLLFGLTDTLYLAWSHYKnytd---ltfsSFCALsk--------aiNCDTVSQSPWSil------lgLPLSYWGF 82  Desulfobulbus prop...
ABS27322   27 VASLLLALGGVALSVALARLHARaha-----glsSFCAInd--------vvNCDRVALSRFStf------lgLPVALWGA 87  Anaeromyxobacter s...
CBX28396   20 AAFISLLLIGIVNSGYLTYHHHYiniiq--pttkSFCAIne--------tfDCDKVAKSDASrf------mgIPVATLGL 83  uncultured Desulfo...
EHQ08437   12 YTGVAVSVVGVVLSTLLLCKHGFsdlc----tssLGCSIdg--------vdGCKELGQSSLSkv------gpFPIAIFGL 73  Leptonema illini D...
AFM13579   14 ALVITGALIGMLFSGILIYEHNGaktq----igsAVCDVnq--------asSCEKAKDSAVGki------fgLPLALYGY 75  Turneriella parva ...
CAN96366   12 ALALSGSLLGLAFSASSTFDYIRhldr---qvhdLHCSFvpglgaqagadtACRVAMYSPYSalfresfwggIPISLFAL 88  Sorangium cellulos...
Feature 1                                                          #  #               
ABW66329   83 FGYGFFLFllgvawhp-tagrkrvWTLLFVISLAFSVYSVVLALISsylirsYCIMCILSYAVNLALLFYAW 153 Desulfococcus oleovorans Hxd3
ABS27036  114 AVFAFLAYrtalvlwr-getsegeTKVLLAASVLPVAMSALFGAVSvvaldtLCKICIGIYAASALCFGGAL 184 Anaeromyxobacter sp. Fw109-5
CBW27650   82 LIGAFLLFgflfk-------deefEGTNHILLLVNAVGCLVLFLYSlialggLCPMCSVYYFLSWGALFIFY 146 Bacteriovorax marinus SJ
ACG71777   91 LAYLVVAAlalsalrrprgdsgwpAGLLFAASAFMAAGAVFLAAISelvigsLCIVCAGSWLVSFALAGCSF 162 Anaeromyxobacter sp. K
ADW18229   83 SAYSLFLFfalatlhr-rnysiylWQCLFLLGFGYSVAALYFGYISatkikaHCILCLGSHAASFALLFLSW 153 Desulfobulbus propionicus ...
ABS27322   88 LGYGLAAVlaaralaharrgvtaaRGLLFAVAAVAVAASAALAVVSelaigaWCLLCMASWATAAGLLATAW 159 Anaeromyxobacter sp. Fw109-5
CBX28396   84 FAHLFVLLfllnahifrikalkaaYTYISLMLFIMALFCAYEAIISfvvlkaICIMCSILYIIDAIVLYLCV 155 uncultured Desulfobacteriu...
EHQ08437   74 LYYAFLTAafllqsi---rprgelAALLLYTTIVGLVVDAVLGYINftqilvPCILCAYTYLITLALFVLAL 142 Leptonema illini DSM 21528
AFM13579   76 AFYGTMAAlalflll---alndivLSLLFWGAISALLFDAFLLLYSlvvlqgICRLCAITYIATVILAVGAY 144 Turneriella parva DSM 21527
CAN96366   89 GAFAFFAAfalyvllsaqhaprraAHFLFVAGLTPLAVSLLMATISamrlgvFCKTCVGMYISSALLAAGGV 160 Sorangium cellulosum 'So c...

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