Conserved Protein Domain Family
VKOR_arc

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cd12918: VKOR_arc 
Vitamin K epoxide reductase family in archaea and some bacteria
This family includes vitamin K epoxide reductase (VKOR) mostly present in archaea and some bacteria. VKOR (also named VKORC1) is an integral membrane protein that catalyzes the reduction of vitamin K 2,3-epoxide and vitamin K to vitamin K hydroquinone, an essential co-factor subsequently used in the gamma-carboxylation of glutamic acid residues in blood coagulation enzymes. All homologs of VKOR contain an active site CXXC motif, which is switched between reduced and disulfide-bonded states during the reaction cycle. In some bacterial homologs, the VKOR domain is fused with domains of the thioredoxin family of oxidoreductases which may function as redox partners in initiating the reduction cascade.
Statistics
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PSSM-Id: 240601
Aligned: 30 rows
Threshold Bit Score: 70.8065
Created: 22-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activeredox center
Feature 1:putative active site [active site]
Evidence:
  • Comment:four cysteines and one serine or threonine are inferred to be the active center

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #             #     #                            
ADN49753   10 VLMLIFSAVGLFASSIVIYTYYYlre-lppLCtsfkspfpgitIDCERVLSSKYSdig-gvPLDLLAAIWFIVNIIlvlm 87  Vulcanisaeta distr...
Q9YB70      9 ALYLAALAVGWLASIGGFIEFRRsllgggfVCkada----kgwINCRSAYVIPQAfiagriHLSELAPIYFTATLAtavl 84  Aeropyrum pernix
ADL19894   10 LLLLAFSAVGLAAALEVYNSFYLhrs-aplACtypvr-vsgvaVNCLDVLSSGYSrvy-sfSLDELAIAWFSADLAlsal 86  Acidilobus sacchar...
AEA13578    8 VLLIAFSVGGLISSALVLYMWYIlgr-mppGCylpqailpgvtVDCVAVLSSPYAhig-pvPLDGLAAVWFVLNIGlvva 85  Thermoproteus uzon...
BAA81478    6 HALLAVTLVGYAASIAGYFEYVSgs----gVCeigdv--gfavVNCSSVYDIPEAvvfgvvHLSVLAPVYFTLLSLvala 79  Aeropyrum pernix K1
EFD92718   12 VILIAMSIVGIISSTIVIIELNIvhs-lppYCkipvs-vggnvLNCAKVLLSPYAsig-pfSLDFLAAIWFIINIIfvvs 88  Candidatus Parvarc...
AEJ39805    7 GRGTAIGLTAIAAGAALATLWVNaap-rtaGCpgsa---vlpvINCAAVVSSAGShla-glPLGVWALFWLVGYWEayry 81  Sulfobacillus acid...
AET34031   19 LAGYEQLGIWLLAAGGLAHTLLNkp---gdVCrrg------rfAGCVVVLGSPYArpl-giPLEYVGAAWFGGVPLafh- 87  Pyrobaculum sp. 1860
AAL63389   19 LLGSRLIALSLLAAAGLLHTLFNkp---saFCaky------kiGGCEAVLSSPYArpf-giPLEYLGAAWFAGVPIayy- 87  Pyrobaculum aeroph...
ABL88911   15 AFGLREVALLVAVAGGLFHTLVLkp---agACvrg------rfSGCEVVLASPYAapl-gvPLQYLGALWFVVAPLahw- 83  Pyrobaculum island...
Feature 1                                              #  #              
ADN49753   88 ydlgpgnlatlainaLFYWRFIGIVVVPYLIFVEtyllhALCIYCTVMHIMIIIDFAVI 146 Vulcanisaeta distributa DSM 14429
Q9YB70     85 gvll---didllaklSYLLAAGGAASVPYLVYLEvrvakAICLWCTIMHLSIILAVASA 140 Aeropyrum pernix
ADL19894   87 tiatg--lpralrvaQAAWRFLGVSFVPYLVYLElfrihAICVYCTTMHVMLIANAVVA 143 Acidilobus saccharovorans 345-15
AEA13578   86 yfrt---fkngvltsLFYWRLVGIAVLPYLLYIElvvlkALCLYCTIMHIFIIIDFILI 141 Thermoproteus uzoniensis 768-20
BAA81478   80 ywir---rsrifliaSSFLSLVGVVTVPYLVYLElfvagAVCLWCTVMHISILLAFALA 135 Aeropyrum pernix K1
EFD92718   89 iamtskstakkvlniMFVWRFLGIIVVGYLLFLEfvvlhAICVYCTAMHIAIVLDFVIV 147 Candidatus Parvarchaeum acidophilus ARM...
AEJ39805   82 -----------asryHLYWSLLGIGGVVYAWSKEwa-vhHLCLWCTVTQVAILVLVGMT 128 Sulfobacillus acidophilus TPY
AET34031   88 ------------lgfGQMWALLAVLGVVLLVGMEvr-lkALCLYCTVAHIIGLICAVFL 133 Pyrobaculum sp. 1860
AAL63389   88 ------------lgiGLVWSVMAFAGVIALVAIEak-lrAFCIYCTVAHVIGLAAAFLL 133 Pyrobaculum aerophilum str. IM2
ABL88911   84 ------------fgfGLFWAVVGLVGIAALVGLEvk-lrAFCLYCTIAHGLGLVVILAL 129 Pyrobaculum islandicum DSM 4184

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