3HI2,3GA8,2KZ8,3GN5,3GN5,3O9X


Conserved Protein Domain Family
MqsA

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cd12870: MqsA 
Click on image for an interactive view with Cn3D
antitoxin MqsA for MqsR toxin
This family includes domains similar to the antitoxin MqsA that binds motility quorum-sensing regulator MqsR, a toxin that is highly upregulated in persisters (dormant cells found in biofilms that are a source of antibiotic resistance), thus forming a unique toxin:antitoxin (TA) pair. MqsA neutralizes MsqR toxicity. It binds its own promoter as well as those of genes important for E. coli physiology, such as mcbR and spy. It also binds zinc and has been shown to coordinate DNA via its C-terminal domain. This family also includes the B. subtilis YokU protein, which is functionally uncharacterized.
Statistics
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PSSM-Id: 240606
Aligned: 71 rows
Threshold Bit Score: 49.993
Created: 23-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding sitetoxin interface
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Structure:3HI2: E. coli antitoxin MqsA binds zinc; contacts at 4.0A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #                               #  #                               
3HI2_A         2 KCPVCHQGEMVSgikDIPYTFR-GRKTVLkgIHGLYCVHCEESIMNKe----ESDAFMAQVKAFRASVNAE 67  Escherichia coli K-12
ZP_10170401    7 ICPLCGGHKKQGt-tTVTVDMG-NTLVVVrnVPATICSLCANAWLSDe----VAGDIEIIVEEAKKNHRQM 71  Desulfobacter postgatei ...
YP_674822     17 GCPQCGSTALREelvKSALWQG-ERLVVVenIPALVCGRCGERFYDDa----TVTALDLLQGDGFPAEMAT 82  Mesorhizobium sp. BNC1
ZP_07018341    6 GCPLCGGKQNPGt-tTFTVDKG-SVLVVVrnVPAMVCDQCGEAWIMDs----VAEDLERIVSEAKSKRSQI 70  Desulfonatronospira thio...
YP_913052      9 CCPLCGGEKISGk-tTMTVELG-YGLVVVrdVPATLCALCGADWIDDs----VAAEIEQIVDEARKKHSQM 73  Chlorobium phaeobacteroi...
YP_004447961   8 QCPICAGRVEQGt-tTFAVDLK-SGLIVVrnVPALVCTQCGEEWIEDs----TAIELEQITARAKAQNSQL 72  Haliscomenobacter hydros...
YP_001995932   8 KCPLCGGSKEQGf-tTFTVDMQ-DTLVVIrnVPATICSLCGNEWLSDe----VAMSIERIVEEAKNKQHDV 72  Chloroherpeton thalassiu...
ZP_10171111    2 DCPLCKGKMEMGt-tILPFEMKnGRVIVVqnVPAKICEQCGEEYVDMdvarnVEALLNRLELDGLSMGFVE 71  Desulfobacter postgatei ...
YP_001230135   2 KCPLCRGKMVPGk-tNLPFSLEgGNVIVVinVPALVCEQCGDDFVEId----VVRKVEKIVDRIEHDGISM 67  Geobacter uraniireducens...
YP_004530894   2 TCFMCKGSLENDh-sTFMVDLG-SCIIIIknVPSQVCTQCGETSYSNt----VAGKLEQIVSSIKKTVVTE 66  Treponema primitia ZAS-2

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