Conserved Protein Domain Family
EcCorA-like_u1

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cd12837: EcCorA-like_u1 
uncharacterized subgroup of the Escherichia coli Mg2+ transporter CorA_like subfamily
A uncharacterized subgroup of the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. The EcCorA_ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA_ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
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PSSM-Id: 213371
Aligned: 58 rows
Threshold Bit Score: 354.914
Created: 26-Jul-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Comment:based on Thermotoga maritima CorA and on partial structures: the intracellular domains of Vibrio parahaemolyticus and Salmonella typhimurium ZntB; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                   #  ##     # #                                       
BAB49763     26 VWADLISPTkeEEATIESWVGVa-IPTREEMEEIEISSRLYIEdgAYFMTATLPaqtevddPLMSPVTFALagnRLITIR 104 Mesorhizobium lo...
ACB96980     27 NWIDAVSPSepERAFLERVLGTr-IPTFADLSEIESTSRIYSNggYLFLSMPAIfrgdenvPITTPLGFVLsksLLISLR 105 Beijerinckia ind...
ABI61108     27 GWIDLHNPTeeEIRLVSQETGQs-IPSRQALEEIENSSRLRLHeeTLYLSMPLVsrs-seePVIGPLGMVVnreRLITIR 104 Granulibacter be...
EHR02396     24 IWADLLDATaeEKQFVERLLGIr-VPSEDSLSEIEASSRLILDngTLYLSSPAVrlnedneAEITPVGFVIgprVLVTVR 102 Bradyrhizobium s...
EJB01838     26 IWMDLFNPDekEIEFIQRRAKVr-VPTRDALSEIEASSRLSREgkVLYLSAPVIghatigeAELSPAGFIVgpdFLVTVR 104 Rhizobium legumi...
EIM30785     25 IWIDLLDPTadETAFVESRTHIq-VPSAAELSEIEASSRLQVRrgIIYLSTPILahsdtpdAFLSPVGFILsptVLVTVR 103 Microvirga sp. W...
ZP_10345999  18 RWVDLIDPDegERERVRDRFGVa-VPTLDELARIDASSRLRADgdTLRMSAPLLsgtdtdrWESAPVGFILtpeVCITVR 96  Sphingomonas sp....
AAW60961     24 VWLDLINPTtdEIDRAEKALGTh-IPRREELEEIESSSRHHEEggVLYLSTPLVrra-edtAFSLPIGFVLtdrRLITVR 101 Gluconobacter ox...
ZP_08698339  24 IWLDLVDPTdtERDLAAHLTGKi-IPQRSDLEEIESSSRLHTDddAVYMSLPLVqrt-eadLSSSPIGFVLtpnWLVTVR 101 Acetobacter acet...
EGG77823     11 AWLDLLNPTp-EEEALAAQVTGlrIPTRSQLDEIESSSRLFMEgdAVYLSTPLVrkt-pddFFVSPVGFVLmheRLLTVR 88  Gluconacetobacte...
Feature 1               #   #              #  #   #   #  ##  #  ## ##  #                        
BAB49763    105 YHEpKAFKTFPLRaekva--tgctSGDTILIGLLEAIVDRLADILERAGRDIETISRDIfearstkvs----krnrdfqe 178 Mesorhizobium lo...
ACB96980    106 FEPlKSFENLQAHitrkd--aegsGGAHAFVAILEVIIDHVADLLEHIGTDLDCISQDIfgfssgpesparrkngkdlre 183 Beijerinckia ind...
ABI61108    105 FQEaQVFDRLHEAlaarq--aggsSGFRLMVALIEALVDRLADVLEMTATDIDRVSGTIfresrqtsrr-paradrmlqa 181 Granulibacter be...
EHR02396    103 FAQlPIFDDIGKRigsd---dsleNGMCVFASLVEAMVDRGADVLEHLGAKVDRLSRGVfkgglvrtkr-pvrssrrmre 178 Bradyrhizobium s...
EJB01838    105 YESlPTFDAVAERlqqd---etlaSGMGVFVALLEAIVDRGADVLEHLAAAVDEVSKTVfkgnlkgsas-prsanftlrr 180 Rhizobium legumi...
EIM30785    104 FAKlVTFDLVAQQihdd---ptlaSNVGVFTALLEAIVDRGADVLEGLRGELDRISRKVfhgnpihlsh-avrstntlrl 179 Microvirga sp. W...
ZP_10345999  97 FVAlQAFDTVAADigrk----pdlLPAEILTRLLEELVDRAADHLEKGASVVNDTSQSVffdqpklrkl--skettnlrd 170 Sphingomonas sp....
AAW60961    102 YADyYGFDIVGRRqaerdpakgepSANEILVEIIEEVINRLADILEGLGRDLDAISKRVfntdrprdp---aragemlre 178 Gluconobacter ox...
ZP_08698339 102 FSDyASFDNAARQvaes---ktgfSSDDTLVMILECIVDRLADVLEHVGLNLNQLSRDVfagydpkgn---irlaswqrt 175 Acetobacter acet...
EGG77823     89 YTGfSAFDVVARQvatq---ttplGANEAGILLLEAVVDRLADILEHLGQALDGMSRDVfqseqpgqa----qagtllrn 161 Gluconacetobacte...
Feature 1        ## ##  ##  ## ##   # ##  ##  ##           ## ##  ## ##  ## ## ###  ######## ###
BAB49763    179 LLKAIGRKEDIASSVRDSLISLQRLAGFLAHVatltkmskdVRARIKTLSRDVLSLADHATFLSQKISFLLDATLGMISI 258 Mesorhizobium lo...
ACB96980    184 VLRRIGRIGNLTSKLSEMLLGVGRIIPFVVSNpsie-lssdEKSRLNNLGRDIASLNEYETRLTDKTQFLLDATLGLTNV 262 Beijerinckia ind...
ABI61108    182 SLRRIGQLGDRLGKIRDTLLGVGRIVPYVITNaqdw-lsdtLTARLESLKADIASLNDYENHLNMKLNFLLDATLGFINI 260 Granulibacter be...
EHR02396    179 ALENIGELADRLAKARDVLLGVGRIASFAGDVggew-itaaSKKRLEAVSKDVASLGDYETRLSDKIQLLLDAVLGFINI 257 Bradyrhizobium s...
EJB01838    181 ALSKVGALGDRSSKARDVLLGVGRMASFTLDVchdv-lsddFRDRLHAVTKDVASLSDYETHLSDKTQFLLDAVLGFITI 259 Rhizobium legumi...
EIM30785    180 TLSAVGAIGERVSQARDVMLGVGRIASFAHDIgeew-itpeFKVRLRAVMKDVASLNEYEAHLSGKVQFLLDAVLGYITI 258 Microvirga sp. W...
ZP_10345999 171 AMRTIGQVSDRTSRVRYTFLSIGRVASFMLDRctpr-ieadIRERLEAVRHDIASLDEFEASLSARAQLIQDAATGFISI 249 Sphingomonas sp....
AAW60961    179 TLRRLGDGGDLASMTRDSLLGLDRILIYIGDRtekd--pqaLRTRIKVAERDIASLNDFDAQTVNKVQFLLDATLGFISI 256 Gluconobacter ox...
ZP_08698339 176 ILRRVGHAEDFSSLIRDSLLGLDRISIFISENrkht-lphgLAARLATVSRDVTSLTDFVSQLSNKIQFLLDAALGFISI 254 Acetobacter acet...
EGG77823    162 MLRRVGRSGDLGSSVRDSLLGLERIAIFLGENkrhd-lserLQARLGTVERDIRSLNDFVSQTANKVQFLLDATLGFISI 240 Gluconacetobacte...
Feature 1       ########## ### ###### ########           ##  ##           #  #    
BAB49763    259 EQNAIIKIFSVAAVIFLPPTLVASIYGMNFTvIPELKWELGYPFAIGLMILSAILPFWYFRRRGWL 324 Mesorhizobium loti MAFF303099
ACB96980    263 DQNDIFRILTVVSVVGIPPTFIASMYGMNFKnIPEYDWAFGYQYGLALIFISTLLPLLWFKRKGWW 328 Beijerinckia indica subsp. ind...
ABI61108    261 EQSGIVKVLTIVSVAGIPPVLIAGIYGMNFKlMPELDWHYGYPMSLGLMVLSILLTIAWFRIRGWF 326 Granulibacter bethesdensis CGD...
EHR02396    258 QQNELFKILTIVSVVGVPPTIMVGIWGMNFKhMPELDWTFGYPLAWLAIIASGVLPLIWFKRRGWF 323 Bradyrhizobium sp. WSM471
EJB01838    260 EQNDIFKVLTIASVVGVPPTLMAGIWGMNFKfMPELSWTWGYPFAWAIIILSAVAPLFWFWRRGWF 325 Rhizobium leguminosarum bv. tr...
EIM30785    259 EQNDLFKVLTIASVVGIPPTLIAGIYGMNFKvMPELDWAWGYSFGLALILVSAVIPLIWFKWRGWF 324 Microvirga sp. WSM3557
ZP_10345999 250 AQNDVVKVLTVVSVVGVPPVLIVGIYGMNFKnMPELSWHYGYPYALALCAVSVIMPLLWFKWRDWI 315 Sphingomonas sp. PAMC 26605
AAW60961    257 EQNDGMKVLTVVSAIGILPTLIAGIYGMNFHnMPELSWKYGYPYGLTLMVLSVVLPLFWFWRRGWF 322 Gluconobacter oxydans 621H
ZP_08698339 255 EQNDGMKILTVVSFIGVAPTLIAGIYGMNFKdIPELKWAYGYWYSLAAMLVSVILPLLWFWRIGWL 320 Acetobacter aceti NBRC 14818
EGG77823    241 EQNNGMKILTVVSFIGVAPTLVAGIYGMNFHdIPELNWKYGYWYSLVLMAATVVLPLLWFWRRGWL 306 Gluconacetobacter sp. SXCC-1

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