Conserved Protein Domain Family
HpCorA-like

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cd12836: HpCorA-like 
Mg2+ transporter Helicobacter pylori CorA-like subgroup
A bacterial subgroup of the Escherichia coli CorA-Salmonella typhimurium ZntB_like (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subgroup includes the Mg2+ transporter Helicobacter pylori CorAs (which can also transport Co2+, and Ni2+); CorA plays an important role in the viability of this pathogen. Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB (members of the EcCorA_ZntB-like family) form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
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PSSM-Id: 213370
Aligned: 16 rows
Threshold Bit Score: 410.883
Created: 26-Jul-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Comment:based on Thermotoga maritima CorA and on partial structures: the intracellular domains of Vibrio parahaemolyticus and Salmonella typhimurium ZntB; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                 #  ##     # #                                       
O25901     30 VLWFELINPTpnELATLSQEYAI-HYNTDHSQRVSSVTKYWEDssSVTINAFFTnqdene----tfhteMATFILsn-nI 103 Helicobacter pylor...
ADY52337   29 LIWVDLQNPTieEKVTIETYFDIkYSSEEETQEIESSSRFSELdnEIIINSSFLsvrqh-----gfeycPVSMILek-gI 102 Pedobacter saltans...
CBK63959   29 ILWIDMLLPTikEQKAVENFMEIsLQTKQQVEEIESTSKYSENenSIISNSNFFvptgd-----sfivePVSFIIsnegV 103 Alistipes shahii W...
ACN99659   29 ILWIDVYNPSqeEINWVVENFNIeFPSIQEREDIEISSRYWEEedSVTINTFFLirege-----nafneTVSFIIkn-nY 102 Sulfurihydrogenibi...
ACT94500   27 LVWVDLQSPSaeEEEWVENKCNIsFQTPQEIVEIESSSRFFEQneTINANSNFLkidrd-----gyetyPISFILnq-nV 100 Dyadobacter fermen...
Q7M9C0     29 VLWIDLLHPSpaEVSYISQIFHLdIPTKEEREEIEQSARYWEDseSITINTYFLvslfastnkkdlhneTVTFLLck-dI 107 Wolinella succinog...
ADB36846   27 TLWVDLQNPTpaEIKSVEEKFDVdFLSQQEQLEIESSSRYIEEddYLIANSNFLvpdaeq----ryinvPVSFLLkd-dT 101 Spirosoma linguale...
EHQ07174   30 VLWVDIIHPDegDRSLLTSYCGAvFQPQSQTEEIESSSRFVDMeeQVIMNSHFLyqsde-----eyhafGVNFIIrn-nI 103 Leptonema illini D...
ADW18460   25 IFWIDLINPTeeEIHQVERDFRVeLFTKQESEEIESSSKYVETedEIGINLNFLipenn-----tfsnePVSFILkd-kI 98  Desulfobulbus prop...
AFL96741   26 VFWVDLIDPTedEKKKIEQVFNIeLFTDQESEEIELSSRYIETeeEIGINMNFTnnkhd-----eeflePVSFILkd-nV 99  Ornithobacterium r...
Feature 1                  #   #            #  #   #   #  ##  #  ## ##  #              ## ##  
O25901    104 LFTIYYGTlEIFDSIQKKvlaspkkfeDGFDILTKIFEVYFEKGVECLEWINKQTSLLRKNIifketsthddILVRLSNL 183 Helicobacter pylor...
ADY52337  103 LFTYRDDDiKTFSESVKKiksnptsytNGYQILCTLLEICIDQDADLIENIAKEISELNKILkatnekvdeqDLLKISSL 182 Pedobacter saltans...
CBK63959  104 LVSVRSAEfRTFRETEKRlqmnyrsysTGYHLFISLLEVRIDFDADLVELIAKQVAALSKDInsens-idkeVLHRISAL 182 Alistipes shahii W...
ACN99659  103 IITVRYRElKTFSEFARRlmtnpsvykTGYHIFSSILEIKIASDSDVLENVSKEISKLGKVVssgnldvtetVFESISYY 182 Sulfurihydrogenibi...
ACT94500  101 LFTYRRGDsKTFADTVKKmkvspegiqGGVDFMLLLLETRIEADADALEGISKDISAISKDLtheqk-trqeVLIRISGL 179 Dyadobacter fermen...
Q7M9C0    108 LFTIRYGEfRTFDEIQNKvlaspknfqNGYDILSKIFEIRVEQDADMLENTAKDTRGLRSGVfgnqf-gydeLLENLSRL 186 Wolinella succinog...
ADB36846  102 LFTYRNADlKSFADTVKRiksrralfsDGAQILISIFESRIDYDADLIELVSGEIKAINRLLdldan-ldreMLLNINDY 180 Spirosoma linguale...
EHQ07174  104 LITTRFTElRSFSEVQHRirlnprpyhTGFHIAVALFELRVDFDADLLESIVKRTSKAARTItadrn-lqdeSLLNIVRL 182 Leptonema illini D...
ADW18460   99 LITQRSHEfRSFSETYRKlrai--kpvDGEDIFLTILETRIDYDADLIEHITDKISEISKQMigdkd-pnreLLLKITTL 175 Desulfobulbus prop...
AFL96741  100 LFTERDNEyVTFRATSRKvrml--kpqTGERAFLMILDTRIDYLADSIELITEKISKLTKKLvkeek-ldsdLLKEITNL 176 Ornithobacterium r...
Feature 1     ##  ## ##   # ##  ##  ##         ## ##  ## ##  ## ## ###  ######## #############
O25901    184 QEFNVTLRDSFFDKRRIITALLRSnkv-dsdTKNNLNIILTDFSSLVESTTVNLNSLDNIQNLFASQVNVEQNKIIKLFT 262 Helicobacter pylor...
ADY52337  183 QNDNMLLRENIIDKQRMVSALLKSnsf-pydKIDLLRIMIKDISSLLEHNKFAFERLEFLQDTFMGLINIEQNRIIKIFT 261 Pedobacter saltans...
CBK63959  183 QESTMSLRENIFDRQRVLSGILRSerf-pndIYPRLQLMIKDVNSLINHADFSFQRLDYIQDAALGLINIEQNEIVKIFS 261 Alistipes shahii W...
ACN99659  183 EDLNMTIRESLIDKQRVLSSLLKSykl-ppdVREEIRILIKDVNSLIDYTKFNFERLNYLQNTFLGLLNIEQNKVIKIFT 261 Sulfurihydrogenibi...
ACT94500  180 QEITMMLRETSIDKQRVLSGILRSqyf-pedRKEHLRIILKDINSLLEYTTFNFERLEYLQNTFMGLINLEQSQVIKIFT 258 Dyadobacter fermen...
Q7M9C0    187 QELNMRIRDSLFDKRRAITALLKTdka-dieVKKNLTIVLKDLNSLVEFTTVNMNALDNIQSLFSSQINIEQNKTIKIFT 265 Wolinella succinog...
ADB36846  181 QELTMLIRENVVDKQRVITSMIRSdgwfneaEQQRLRTLIKDINSLIEHTNFIFERLEFLQNTYLGLIDLEQNRVVKIFT 260 Spirosoma linguale...
EHQ07174  183 QEMTMRITESVIDKERVVLSMLRSewf-ppdCNARLQILLKDIESLRQHAEFNFNRLEYLQDSLLGLINLDQNRIIKIFS 261 Leptonema illini D...
ADW18460  176 QETTIAIRENIVEKQRILSSMLKSkmf-pkeDYENMRIMIKDVGSLLDHTSFNFERLEFLQNTFLGLVDMEQNRVIKIFT 254 Desulfobulbus prop...
AFL96741  177 QEKSMVIRENSMEMQRVLSSLNKSrif-pndFYETITIMLKDLSSLLEHVSFNFHRLEFLQDTFQGLVDMEQNQIMKVFT 255 Ornithobacterium r...
Feature 1      ### ###### ########           ##  ##                     #  #    
O25901    263 VATMAMMPPTLIGTIYGMNFKfMPELEWQYGYLFALIVMAi----------STILPVIYFKKKGWL 318 Helicobacter pylori 26695
ADY52337  262 VATVAFMPPTLIASIYGMNFTnMPELNWKYGYGTAILLMLi----------SSFGTIIYFKKKKWL 317 Pedobacter saltans DSM 12145
CBK63959  262 VAAVIFMPATLIASIYGMNFKfMPELDWTLTLGNGWNIPLgyifaiglmifCSALTIWYFKYKKWL 327 Alistipes shahii WAL 8301
ACN99659  262 VIATIFIPPTLIASIYGMNFEnMPELHWKYGYYFSLLLMVl----------TATVPLYFFKKRGWL 317 Sulfurihydrogenibium azorense Az...
ACT94500  259 VVTIIFMPPTLIAGIFGMNYQhIPSTGEPWGFWLSLFLMVf----------SSLVVLWFFRRKKWI 314 Dyadobacter fermentans DSM 18053
Q7M9C0    266 VATVGFMPPTLIASIYGMNFDvMPELHWEWGYPLTLCLMVi----------STMIPILYFKKKKWL 321 Wolinella succinogenes DSM 1740
ADB36846  261 VVSLVFLPPTLLASIWGMNFDeMPEVHWKYGYVFALAMMVl----------SSALTVWIFRRKNWL 316 Spirosoma linguale DSM 74
EHQ07174  262 VLAIIFMPPTLIASAYGMNFRfMPELEWIFGYPFALFLMIg----------SSVLTYLVFRLRRWL 317 Leptonema illini DSM 21528
ADW18460  255 VVTVIFMPPTLIASAYGMNFKfMPELDEIWGYPFAVLLMIl----------SSAMTLLFFRRKKWL 310 Desulfobulbus propionicus DSM 2032
AFL96741  256 IMTVIFAPATLIAGIYGMNFEyMPELDEKYAYPLALLGILi----------SMVAPLGYFKMKKWI 311 Ornithobacterium rhinotracheale ...

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