Conserved Protein Domain Family
EcCorA_ZntB-like_u1

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cd12826: EcCorA_ZntB-like_u1 
uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family
A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. The EcCorA-ZntB_like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB_like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, as in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
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PSSM-Id: 213360
Aligned: 45 rows
Threshold Bit Score: 219.745
Created: 16-Jul-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Comment:based on Thermotoga maritima CorA and on partial structures: the intracellular domains of Vibrio parahaemolyticus and Salmonella typhimurium ZntB; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                 #  ##    # #                                          
EGC73773     14 IELLTPEEFQRLYAEKfp---rsFKGNELEQIRFCKADRFYQRVs---GTFAIPRKKdpsa---ekiRFGYYLle--dTL 82  Lachnospiraceae ...
EHO20556     23 FGIYRLEEWKGLVEAFgfs--pgTLVELNHMDQSRTLHKLDSYYg---YCFGFVHPLkvrk--eaaaGIGLYCrq--rEV 93  Erysipelotrichac...
EFR39214     23 FGIYRLEEWKGLVEAFgfs--pgTLVELDHMDQSRTLHKLDSYYg---YCFGFVHPLkvrk--eaaaGIGLYCrq--rEV 93  Clostridium sp. ...
EFE46295     24 AGVYRMAEMEPLLAHFgf---apQTLRELKEHHQHTVNKLDAYFg---YCFGLVHEIikqdeelsfiHIGVYFkk--nLI 95  Eubacterium sp. ...
ZP_06645554  24 AGVYRMAEMEPLLAHFgf---apQTLRELKEHHQHTVNKLDAYFg---YCFGLVHEIikqdeelsfiHIGVYFkk--nLI 95  Erysipelotrichac...
EFW05545     24 IGMMTLDELKDCHHYFgisqrsiRRCEETSSLNQNIIIPHNTYYy---GLINLINARdvfv---kkdSLAFFIfknlfLV 97  Coprobacillus sp...
EEC57403     25 FGYITLDELKDNYDELgl---pyETVIECASSSLRHRTSMDTYDe---VSFGIVSMLdmknikgrrdRIGFYIkrgmfIL 98  Bacteroides pect...
ABX42326     24 VGIITLKELDEIYEFFdf---seSTLTTCRSENKNIQNTIAVYDd---YSFGIINVIdskdihkspdKVAFYImsnlfLI 97  Clostridium phyt...
AAS11523     24 AGYIKFKELIELQGLLg-----lDPLFIEQCSDFSQQNTLGVWEd---YSFGVINIVemenifkdrdTIGLYIsknlfLA 95  Treponema dentic...
ADO36322     30 IGVYTYEAAGALGDKFg------LHSGLLKRTLSNDSIRFESYDrldmLCIAVVDLAvmkl---dvpTMHLFIre--nAF 98  Eubacterium limo...
Feature 1                      #   #             #  #   #   #  ##  #  ## ##  #             ## ##
EGC73773     83 IFIENNGev-rRILDEMQGYqmt----ditSASLLLFDFMEYLIKDDMLYLQQYEEKLTQMEEMLldge--lkdFNRSLL 155 Lachnospiraceae ...
EHO20556     94 ILISENTdqllDFFRLLQQLpaa-----qlSAEHILSLFFEFLLKKHKEEHDQLEDLIEELDNDVlndn--lqnFNQRIT 166 Erysipelotrichac...
EFR39214     94 ILISENTdqllDFFRLLQQLpaa-----qlSAEHILSLFFEFLLKKHKEEHDQLEDLIEELDNDVlndn--lqnFNQRIT 166 Clostridium sp. ...
EFE46295     96 LLVCEDE----KALQRFQHRlelip-ntsySLEHVLAILLESVLAPMHPLFESIENTIMQMEEDIlsmq--kvtMTANIM 168 Eubacterium sp. ...
ZP_06645554  96 LLVCEDE----KALQRFQHRlelip-ntsySLEHVLAILLESVLAPMHPLFESIENTIMQMEEDIlsmq--kvtMTANIM 168 Erysipelotrichac...
EFW05545     98 VVLDDED----KHISEVFQSssdyvlergvSITRLVYYFLSELISKDYEYIEELQEEIEELESQDdeek--sltFTNSLR 171 Coprobacillus sp...
EEC57403     99 VRIEDEDdsvgQLFSKAVKKyek-----nvTLEKIICSIMELLLDGSTEALEKIEERTTLLEARLvngs-vdpeINREIF 172 Bacteroides pect...
ABX42326     98 VDIFDEDkstiSALDMVLARtkq----nkaTLEKIIYNFLSRLIFEENIEIENLELKISKLEKRVfsne--iknFNDELL 171 Clostridium phyt...
AAS11523     96 IEIIDKDysaqKAFEAALQQtiv----rerNIPRILNRFFKELIKSHTGVYHRFRKKISELEMRVwekieedsnFESELS 171 Treponema dentic...
ADO36322     99 FIVCEDR----KFVSRILKRisayd-klevSFGRLLFHLFDKLLEDDNSYLDKFEEKVMALEKKIiddk-rnknYVNNII 172 Eubacterium limo...
Feature 1         ##  ## ##   # ##  ##  ##          ## ##  ## ##  ## ## ###  ######## ##########
EGC73773    156 EVRKDLSALSAYYEQLSDVGETLQQNAAELGDEqDKFLFGLYYERAERLYAMVQNLKEYSMQLREMHQTQIDIRQNEIMK 235 Lachnospiraceae ...
EHO20556    167 GIRNRIRYLLQYDEQFSDVCEELLEDENDLFAReQLHHLRICSDRVERLGQHTRTLRDYSVQVRESYQAQVDIRLNRMMY 246 Erysipelotrichac...
EFR39214    167 GIRNRIRYLLQYDEQFSDVCEELLEDENDLFAReQLHHLRICSDRVERLGQHTRTLRDYSVQVRESYQAQVDIRLNRMMY 246 Clostridium sp. ...
EFE46295    169 KIRREITMLSHYFAQMMDIAEELQQDENDLFQKdQLHHIRIFADRVQRYEQSVQMLKDYIIQVRELQQSQYDLNLNRMMY 248 Eubacterium sp. ...
ZP_06645554 169 KIRREITMLSHYFAQMMDIAEELQQDENDLFQKdQLHHIRIFADRVQRYEQSVQMLKDYIIQVRELQQSQYDLNLNRMMY 248 Erysipelotrichac...
EFW05545    172 QLNKELLLLRTYYDNLVIIGEELQMNHHHVFEEdDMRYFEIFTRRIERFADNVQMLRELLNQANEAHQSKLDYKLNKTMQ 251 Coprobacillus sp...
EEC57403    173 RMRNELTIQKHYYEQLIDIGEAIQQDANNVFEDsELRYIGIFTAKAGRLSDNTQVLNENLVHLREALNAALDYNLNRIMK 252 Bacteroides pect...
ABX42326    172 LIQKKLSTMRNYYEQLANIGEDLMENENDIFQDeNLRYFKMFTNRVDRLSNNIQMLREYVSQVREAYQAQMDYNINNIMK 251 Clostridium phyt...
AAS11523    172 NINNELLTLFSYYDQLEDFCQELAENENEIFTEeELTIINLLSKRVERYGANIRILREYSNQLRESYQAQLDLHLNKIMK 251 Treponema dentic...
ADO36322    173 GYRKKLVLLKRYYEQVSVVFKYIDLNENKLFDHqSLKLLRILSGKVDRLYNNVLSLIEYVAQIREAYQAEVDINLNTTMK 252 Eubacterium limo...
Feature 1       ### ### ###### ########           ##  ##           #  #    
EGC73773    236 ILTVVTTIFMPLTLIAGWYGMNFKNMPELDAKYGYIVVSAIClaIVAVEVWIFRKKKWF 294 Lachnospiraceae bacterium 9_1_43BFAA
EHO20556    247 IFTIVTVIFLPLTLIVGWYGMNFTGMPELHWRYGYPFVIILSlvSIGICVWSIYRKRIR 305 Erysipelotrichaceae bacterium 21_3
EFR39214    247 IFTIVTVIFLPLTLIVGWYGMNFTGMPELHWRYGYPFVIILSlvSIGICVWSIYRKRIR 305 Clostridium sp. HGF2
EFE46295    249 VFTIVTIIFLPLTLIVGWYGMNFTTMPELTWRYGYLFVIALSliTIVGCIWYFKKKDIL 307 Eubacterium sp. 3_1_31
ZP_06645554 249 VFTIVTIIFLPLTLIVGWYGMNFTTMPELTWRYGYLFVIALSliTIVGCIWYFKKKDIL 307 Erysipelotrichaceae bacterium 5_2_54FAA
EFW05545    252 FFTVVTTIFMPLTLIAGWYGMNFTNMPELRAPYGYITVIGVSiiVVVSLVFWFKKKKFF 310 Coprobacillus sp. 29_1
EEC57403    253 IFTVVTTIFLPLTLIAGWYGMNFKNMPELYWDYGYQCVIALSiiVVVACIIFFKKKKFM 311 Bacteroides pectinophilus ATCC 43243
ABX42326    252 VFTVVTTIFLPLTLIVGWYGMNFKFMPEVTWRYGYLGVVFLSiaVVIFCIIWFKKKKLM 310 Clostridium phytofermentans ISDg
AAS11523    252 IFTVVTTIFLPLTLVVGWYGMNFTHMPELSWKYGYITVIILSiaIVVLGLCWFKKKKLI 310 Treponema denticola ATCC 35405
ADO36322    253 LFTVITTIFFPLSLIAGWYGMNFNMPEYQSLYGYPMVIILSAg-VIVASVIYFKRNHWF 310 Eubacterium limosum KIST612

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