Conserved Protein Domain Family
EcCorA-like

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cd12825: EcCorA-like 
Escherichia coli Mg2+ transporter CorA_like subfamily
A bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB_like(EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporters Escherichia coli, Salmonella typhimurium, and Helicobacter pylori CorAs (which can also transport Co2+, and Ni2+). Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.
Statistics
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PSSM-Id: 213359
Aligned: 9 rows
Threshold Bit Score: 335.825
Created: 29-Aug-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Comment:based on Thermotoga maritima CorA and on partial structures: the intracellular domains of Vibrio parahaemolyticus and Salmonella typhimurium ZntB; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               #  ##     # #                                         
P0ABI6     28 WIDLVepdddeRLRVQSElgqslATRPELEDIEasARFFEDddGLHIHSFFFfedaedhagnsTVAFTIrd--gRLFTLR 105 Escherichia coli s...
BAB49763   27 WADLIsptkeeEATIESWvgvaiPTREEMEEIEisSRLYIEdgAYFMTATLPaqtevddplmsPVTFALag--nRLITIR 104 Mesorhizobium loti...
O25901     32 WFELInptpneLATLSQEya-ihYNTDHSQRVSsvTKYWEDssSVTINAFFTnqdenetfhteMATFILsn--nILFTIY 108 Helicobacter pylor...
AEA42487   29 SIRFYdykeedLNWVKSNfnidlSIMNHVEDIEisSHFQENdyQSSFHFSLPqykqknlmveeSLFVVLte--eRVFGFF 106 Fluviicola taffens...
EAY28292   29 NIRLIdftqeeLQSLAQKyglhlGVFNKKEDIEisSHYMDLhnQLSITFTVPsyaaeslmeeqNMHIIIkd--nIFFTFM 106 Microscilla marina...
EAZ83197   29 VMQFLdyspseLNWLEENyqldfTILKHYEDIEisSHFLENenQAAFHFSIPyftndkkmieePLFIIIsgaglFLFSSS 108 Algoriphagus sp. PR1
ADO83383   29 SIQLMeasekeITTLAKHfdfiiQPLDKRSEIEisSRYVEIdsQIFLNLTFPnltkdqtieeaFIHVIIlk--dILILNL 106 Ilyobacter polytro...
AAC06977   36 WFDLFnpteeeIEFLRKQtgfsmPPKEILGDIEisSKYIEDkdYLEVTLSFVipqke-eilvePVVFYIke--kFFVTVR 112 Aquifex aeolicus VF5
ADC88719   30 WLDVEnpteeeIKWLSSTigfqmPPREVFGDIEisSKYREEgeSIYMSLSFVvqqkd-dikvePVLFFIkg--rYIATLR 106 Thermocrinis albus...
Feature 1               #   #             #  #   #   #  ##  #  ## ##  #                     ##
P0ABI6    106 EREl--PAFRLYRMRarsqs-mvdgNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVImeghqg------deydeALS 176 Escherichia coli s...
BAB49763  105 YHEp--KAFKTFPLRaekva-tgctSGDTILIGLLEAIVDRLADILERAGRDIETISRDIfearstkvskrnrdfqeLLK 181 Mesorhizobium loti...
O25901    109 YGTl--EIFDSIQKKvlasp-kkfeDGFDILTKIFEVYFEKGVECLEWINKQTSLLRKNIifket-------sthddILV 178 Helicobacter pylor...
AEA42487  107 NSSl-gDYFTDIYGHkfdsrmntlyQVEDLFKFLIEFLSDYYADITENIAKRIKQLASRVlvkke--------fmedDLD 177 Fluviicola taffens...
EAY28292  107 SASm-eEAINLLTKYrydfdrlqfnSHEELFVFQVGVITDYFADVVESISDKIKNTFYDTlqpkq--------fteqDLD 177 Microscilla marina...
EAZ83197  109 NLDr--YINETYPSKinsl--rrlsNLKGIFKFQFEFISDHFADITEYLSRKIKALANEIlieke--------ftsnVMD 176 Algoriphagus sp. PR1
ADO83383  107 NGVsdiSLIQILKNRifyt--sninSDQELPLLFLSSLTDYYADLIELVSKKVKRYFKEVldlkn--------isveELD 176 Ilyobacter polytro...
AAC06977  113 YRDi--PSIMIFKNRtnfqr-kffqFPESLFAEILGIEVDRIGDRLELLGNKIKDIWRQMfveq----------seeMIR 179 Aquifex aeolicus VF5
ADC88719  107 YRDi--PTLLIFLGRaqsqr-lffqFAESVFAEIVKIEVDRIGDRLEILGRRIRNLRKEIlqeq----------sqeVVK 173 Thermocrinis albus...
Feature 1      ##  ##  ## ##   # ##  ##  ##           ## ##  ## ##  ## ## ###  ######## ######
P0ABI6    177 TLAELEDIGWKVRLCLMDTQRALNFLVRKarl---pggQLEQAREILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQN 253 Escherichia coli s...
BAB49763  182 AIGRKEDIASSVRDSLISLQRLAGFLAHVatltkmskdVRARIKTLSRDVLSLADHATFLSQKISFLLDATLGMISIEQN 261 Mesorhizobium loti...
O25901    179 RLSNLQEFNVTLRDSFFDKRRIITALLRSnkv---dsdTKNNLNIILTDFSSLVESTTVNLNSLDNIQNLFASQVNVEQN 255 Helicobacter pylor...
AEA42487  178 TITQLNFNNILIKESLNEFRRILRLHKKGvres--kssVKDKIDEELNDLAVVSDYIQFNFDRLDDLKENISNKIELEQN 255 Fluviicola taffens...
EAY28292  178 ALTKNNFNNFLIREAVSNFQRIILLLRKRfse---ndkIVSKLSIEIKDLNVIAEHVANNFERINDLKINVNSKIELEQN 254 Microscilla marina...
EAZ83197  177 VITQYNFNNLLIKEAMIETRRVLRLYLKSdwee--keeLKEDIKNELNDLAAISDYIQFNFDRLDDLKENVSNKIDLEQN 254 Algoriphagus sp. PR1
ADO83383  177 NLTKIKLDNIQLKECLIELQRIILQLRRSpam---nerSQELLISESKDLSVINGHINYNFDRLNDLKDNISSKIELEQN 253 Ilyobacter polytro...
AAC06977  180 ELAFYDELNITLRESINEKIRIITKALKSpli---nahTKKELRIIYEDLTTLLEYTSFYMEKIDSIQNSLLGLITIRQN 256 Aquifex aeolicus VF5
ADC88719  174 DISYYDELNITLRESINEKLRVLSHFVKSprv---naqTKRDIKTAIDDLSTLLDYTGFYMHKIDSIQNTLLGLISVKQN 250 Thermocrinis albus...
Feature 1     ####### ### ###### ########           ##  ##           #  #    
P0ABI6    254 RIIKIFSVVSVVFLPPTLVASSYGMNFEfMPELKWSFGYPGAIIFMilAGLAPYLYFKRKNWL 316 Escherichia coli str. K12 substr. W...
BAB49763  262 AIIKIFSVAAVIFLPPTLVASIYGMNFTvIPELKWELGYPFAIGLMilSAILPFWYFRRRGWL 324 Mesorhizobium loti MAFF303099
O25901    256 KIIKLFTVATMAMMPPTLIGTIYGMNFKfMPELEWQYGYLFALIVMaiSTILPVIYFKKKGWL 318 Helicobacter pylori 26695
AEA42487  256 KIFKLLTMVTFCISMPTLIAGIYGMNFQnMPELATKYGYLFALIAMllSVVIPLVYFKRKKWL 318 Fluviicola taffensis DSM 16823
EAY28292  255 NIFKILTIITVCISLPTLIAGIYGMNFTnMPELKVSYGYPLALLGIvlSFVMPLLYFKSKKWF 317 Microscilla marina ATCC 23134
EAZ83197  255 HIFKMLTVVTVCISLPTFIAGVYGMNFVnMPELKTEFGYPIVLIAMicSAILPFLYFKKKKWL 317 Algoriphagus sp. PR1
ADO83383  254 HIIKIFTVVTVCIAPPSLIAGIYGMNFDiMPELGWNLGYPFSVIIMilSIIITLVILKFKKWI 316 Ilyobacter polytropus DSM 2926
AAC06977  257 EAVKVFTVLATIFLPATLIASIFGMNFKhMPELHWKYGYPYSLFLMvfVTLVLLFWVRRKGWL 319 Aquifex aeolicus VF5
ADC88719  251 EAVKVFTVLATVFLPATLIASIYGMNFKhMPELEWRYGYPYALGLMvlVTVALLLWTKKKGWL 313 Thermocrinis albus DSM 14484

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