3TL8,2LF6,2LF3


Conserved Protein Domain Family
HopAB_BID

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cd12803: HopAB_BID 
Click on image for an interactive view with Cn3D
BAK1-interacting domain of the HopAB family of Type III Effector proteins
HopAB family members are type III effector proteins that are secreted by the plant pathogen Pseudomonas syringae into the host plant to inhibit its immune system and facilitate the spread of the pathogen. AvrPtoB, also called HopAB3, is the best studied member of the family. It suppresses host basal defenses by interfering with PAMP (pathogen-associated molecular signature)-triggered immunity (PTI) through binding and inhibiting BAK1, a kinase which serves to activate defense signaling. It also recognizes the kinase Pto to activate effector-triggered immunity (ETI). AvrPtoB contains an N-terminal region that contains two kinase-interacting domains (KID) and a C-terminal E3 ligase domain. The first KID recognizes the PTI-associated kinase Bti9 as well as Pto, and is referred to as the Pto-binding domain (PID). The second KID interacts with BAK1 and FLS2, which are leucine-rich repeat-containing receptor-like kinases, and is called the BAK1-interacting domain (BID). This family also contains a unique member, HopPmaL, which is shorter and lacks the C-terminal E3 ligase domain.
Statistics
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PSSM-Id: 214002
Aligned: 8 rows
Threshold Bit Score: 96.3929
Created: 16-Aug-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
BAK1 binding
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:BAK1 binding site [polypeptide binding site]
Evidence:
  • Structure:3TL8: Pseudomonas syringae AvrPtoB binds the kinase BAK1; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       ## #                                  #####                  #   #####    #  ## 
3TL8_B       32 MRNRGNDEADAALRGLVQ-----QGVNLEHLRTALERHVMQRLPIPLDIGSALQNVGINPSIDL-GESLVQHPLLNLNVA 105 Pseudomonas syri...
2LF6_A       15 RHNHSANQTNEALRRLTQ-----EGVDMERLRTSLGRYIMSLEPLPPDLRRALESVGINPFIPE-ELSLVDHPVLNFSAA 88  Pseudomonas syri...
2LF3_A       26 MRNRGNNEADAALQALAQ-----NGINMEDLRAALEAYIVWLRPIPLDIANALEGVGITPRFDNpEEAKVDNPLMNLSSA 100 Pseudomonas syri...
Q8RK09      236 RHNHSANQTNEALRRLTQ-----EGVDMERLRTSLGRYIMSLEPLPPDLRRALESVGINPFIPE-ELSLVDHPVLNFSAA 309 Pseudomonas sava...
CAQ35651    250 THQRQAHRANRQPSGAWVerlrrSGIDMSRLRSAVDNTLLYAANLPADIRRALNAAGIDTRIEE-TTSLVDHPLLQLQQE 328 Ralstonia solana...
EGH58695     13 MRNRGNIDADVALRDLAQ-----QGVNMGRLHAALGAHIMHGRALPEDLRRALGGVGIRPYNET-SLSLMEHPLLNLNIA 86  Pseudomonas syri...
ZP_04588523   1 MRNLGDNMANVALQAFAE-----QGGDLERLRAAIESYVMQRRPIPEDIGRRLQSVGIPPTIDS-NESILNNPLLNLNVA 74  Pseudomonas syri...
Q8RSY1      274 MRNRGNDEADAALRGLVQ-----QGVNLEHLRTALERHVMQRLPIPLDIGSALQNVGINPSIDL-GESLVQHPLLNLNVA 347 Pseudomonas syri...
Feature 1        #    
3TL8_B      106 LNRMLG 111 Pseudomonas syringae pv. tomato
2LF6_A       89 LNRMLA 94  Pseudomonas syringae pv. phaseolicola 1448A
2LF3_A      101 LKRRLD 106 Pseudomonas syringae pv. maculicola
Q8RK09      310 LNRMLA 315 Pseudomonas savastanoi
CAQ35651    329 IRRAES 334 Ralstonia solanacearum MolK2
EGH58695     87 LNRRLG 92  Pseudomonas syringae pv. maculicola str. ES4326
ZP_04588523  75 LNRRLG 80  Pseudomonas syringae pv. oryzae str. 1_6
Q8RSY1      348 LNRMLG 353 Pseudomonas syringae pv. tomato str. DC3000

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