3HGK,3TJY,3HGL,3SVI


Conserved Protein Domain Family
HopAB_PID

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cd12802: HopAB_PID 
Click on image for an interactive view with Cn3D
Pto-interacting domain of the HopAB family of Type III Effector proteins
HopAB family members are type III effector proteins that are secreted by the plant pathogen Pseudomonas syringae into the host plant to inhibit its immune system and facilitate the spread of the pathogen. AvrPtoB, also called HopAB3, is the best studied member of the family. It suppresses host basal defenses by interfering with PAMP (pathogen-associated molecular signature)-triggered immunity (PTI) through binding and inhibiting BAK1, a kinase which serves to activate defense signaling. It also recognizes the kinase Pto to activate effector-triggered immunity (ETI). AvrPtoB contains an N-terminal region that contains two kinase-interacting domains (KID) and a C-terminal E3 ligase domain. The first KID recognizes the PTI-associated kinase Bti9 as well as Pto, and is referred to as the Pto-binding domain (PID). The second KID interacts with BAK1 and FLS2, which are leucine-rich repeat-containing receptor-like kinases, and is called the BAK1-interacting domain (BID). This family also contains a unique member, HopPmaL, which is shorter and lacks the C-terminal E3 ligase domain.
Statistics
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PSSM-Id: 214001
Aligned: 9 rows
Threshold Bit Score: 114.936
Created: 16-Aug-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Pto binding
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:Pto binding site [polypeptide binding site]
Evidence:
  • Structure:3HGK: Pseudomonas syringae AvrPtoB PID binds Pto; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                             #   ##  ######     #   #     #######                    
3HGK_E      4 GAVAHANSIVQQLVSEGADISHTRNMLRNAMNGDAVAFSRv-EQNIFRQHFPNMPMHGISRDSELAIELRGALRRAVHQQ 82  Pseudomonas syring...
3TJY_A      2 GAVPRANRIVQQLVEAGADLANIRTXFRNXLRGEEXILSRa-EQNVFLQHFPDXLPCGIDRNSELAIALREALRRADSQQ 80  Pseudomonas syring...
3HGL_A      4 GAVAHANSIVQQLVSEGADISHTRNXLRNAXNGDAVAFSRv-EQNIFRQHFPNXPXHGISRDSELAIELRGALRRAVHQQ 82  Pseudomonas syring...
3SVI_A      4 GAVPRANRIVQQLVEAGADLANIRTXFRNXLRGEEXILSRa-EQNVFLQHFPDXLPCGIDRNSELAIALREALRRADSQQ 82  Pseudomonas syring...
Q8RP04    141 GAVPRANRIVQQLVEAGADLANIRTMFRNMLRGEEMILSRa-EQNVFLQHFPDMLPCGIDRNSELAIALREALRRADSQQ 219 Pseudomonas syring...
Q8RK09     90 PEAQQAERIVQELVRGGADLNNVRTMLRNVMDNNAVAFSRv-ERDILLQHFPNMPMTGISSDSVLANELRQRLRQTVRQQ 168 Pseudomonas savast...
CAQ35651  133 ASVPDVNGIIAQFRNAGVDLADVHQTLSDVMNGDPVCLDGh-TIDILRQHFPNMVTVGISEGNALAVALREALGQFVPSE 211 Ralstonia solanace...
Q2QCI9    138 GAVPHANRIVQQLVDAGADLAGINTMIDNAMRRHAIALPSrtVQSILIEHFPHLLAGELISGSELATAFRAALRREVRQQ 217 Pseudomonas syring...
Q8RSY1    124 GAVAHANSIVQQLVSEGADISHTRNMLRNAMNGDAVAFSRv-EQNIFRQHFPNMPMHGISRDSELAIELRGALRRAVHQQ 202 Pseudomonas syring...

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