3VLD,3VLD,3VLF,4A3V,3VLE,4A3T


Conserved Protein Domain Family
Hsm3_like

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cd12794: Hsm3_like 
Click on image for an interactive view with Cn3D
Hsm3 is a yeast Proteasome chaperone of the 19S regulatory particle and related proteins
This group contains proteins related to the Hsm3 protein (Yeast Proteasome Interacting Protein) of Saccharomyces cerevisiae. S. cerevisiae Hsm3 is a chaperone of regulatory particles involved in proteasome assembly. The 26S Proteasome is a large, 2.5 MDa complex comprised of at least 33 subunits, and relies on chaperones to facilitate correct assembly. The proteasome contains a cylindrical 20S core particle and 1-2 19S regulatory particles, comprised of AAA-ATPase and non-ATPase subunits. The proteasome acts in ubiquitin-dependent proteolysis. The 19S RP targets and opens the the ubiquitin-tagged substrate and releases ubiquitin. Hsm3 acts as a 19S chaperone, binding to the C-terminal domain of Rpt1 (the 6 ATPase subunits of the 19 S regulatory particle(s). Hsm3 has a C-shape composed of 11 HEAT repeats. Mutations in the Hsm3-Rpt interface disrupt formation of the 26 S Proteasome complex.
Statistics
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PSSM-Id: 240614
Aligned: 27 rows
Threshold Bit Score: 314.968
Created: 1-Feb-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
heterodimerhomodimer
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Structure:4A3V: Saccharomyces cerevisiae Regulatory Particle Proteasome Assembly Chaperone Hsm3 binds Rpt1 C-terminal fragment; contacts at 4A
  • Comment:Mutations in the Hsm3-Rpt1 interface disrupt formation of the 26 S Proteasome complex.
  • Structure:3VLF: Saccharomyces cerevisiae Proteasome Interacting Protein binds Rpt1; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3VLD_A        29 VENLLTQLENELNed--nlPEDINTLLRKCSLNLVTVvslpd------------xdvkPLLATIKRFLTsnvsydSLNYD 94  Saccharomyces c...
4A3V_A        14 VENLLTQLENELNed--nlPEDINTLLRKCSLNLVTVvslpd------------mdvkPLLATIKRFLTsnvsydSLNYD 79  Saccharomyces c...
CCH61670      18 INTTLQNINTTLQninttsITQLNKLIDVCSLNLSQHtpv----------------psSLLVNLKQTLLhp--piGLDFD 79  Tetrapisispora ...
CCF57417       4 IQLLLSDLNASLSie--plPRDVNDQILKSALNLKTIssldd-----------qsimlQVLDKIKSLLYrdn-irTLDYT 69  Kazachstania af...
CCE66108      10 VVNIINETYIALEtn--plPTNINSLLEKCLTNIRYLsssp-------------vnldPLLRSIKALLLdkeeylFLDDQ 74  Tetrapisispora ...
XP_002421520   6 SYKVLTNLETSYEr----kQPVGSKLIDRYALTIDQStvtqh------------syfeQIIPAINRILMdseayrIDPDN 69  Candida dublini...
EGW29882       3 TTTVLDHLNTCYEt----kQPIDNDLIDTFTTSVNSHtpd----------------lpQLISIINQILLge--snIDPMG 60  Spathaspora pas...
XP_001385970  14 TLSVIDHLTKSYDn----kSEIDSTLIDDYITVLGSIdllg--------------aiaDFIPIINHILTdnlyhqIDPNR 75  Pichia stipitis...
CCE81157       7 TREVAEHLEGCLEs----rSRVNGQILRDFVFGMSGGgnpvsemlee--rkvtgeqlgRVVLAVNGVLNdgeyaeLDPEG 80  Millerozyma far...
XP_458251     10 SVKTHVHLNEILNn----dKVVNATLIENYILQLKNNrsiifpdeqpngsigsnkfisLFIPTINSLLNgehyfeIDPER 85  Debaryomyces ha...
Feature 1                                                                                        
3VLD_A        95 YLLDVVDKLVpxaDFDDVLEVYsAEDLVKALRSei--dpLKVAACRVIensqp-----kglfATSNIIDILLDILFdekv 167 Saccharomyces c...
4A3V_A        80 YLLDVVDKLVpmaDFDDVLEVYsAEDLVKALRSei--dpLKVAACRVIensqp-----kglfATSNIIDILLDILFdekv 152 Saccharomyces c...
CCH61670      80 SILELLQKIIsitDFDTITNIYsLSDLQSALDSni--pqLAISTLHIIns-----------sPSPLCYPHVLQLYFnv-s 145 Tetrapisispora ...
CCF57417      70 LLFDLSDIILqlvDSELLNQIIsLEDLHKALESsn--tnIIILSCKIItk----------fnTFKTFQTDLLYLYFntet 137 Kazachstania af...
CCE66108      75 LMIEVMDHILkiaPFDLVLNVFtMKDIESALISnn--tsLIKSALKVIelssp-----ksifASSPLFDLVLKLYFye-e 146 Tetrapisispora ...
XP_002421520  70 VLIRLLPEILshlSFEQILMYYpNDFILHFLFEdki-enVSVLCLEVIllnlpepetlhflrDNNMIYRLLREIYFkk-e 147 Candida dublini...
EGW29882      61 MLVALLEKLLgnlSFKEILQVYpAEFILQYLVNyeenpvVNQLCLKILnlnlhde-qtqeflRSNGVLIKLLEIYFkr-n 138 Spathaspora pas...
XP_001385970  76 LLIELLQKIVsrlSFGQIVSVYsPEFIVSSLASsdn-vpITKLCLSIIiqklhep-etvsfiAENCISFILLKNYLsdak 153 Pichia stipitis...
CCE81157      81 EVVNMLRKVLmgmRMADILQLYsPEFVINGLQGgp---gVSCMVVDVLaakaded-atvelmRGTLVMTVLLKKLFcs-d 155 Millerozyma far...
XP_458251     86 VVISLLDAILaylNIEEILSLYpLDFIINGLTGds---aICCMIIRLLrnnatse-ttvklfDETAILDTILSRYFek-n 160 Debaryomyces ha...
Feature 1          ## ##  #                                      #   ##  #                       
3VLD_A       168 ENDKLITAIEKALERLst----dELIRRRLFDn--nLPYLVSVKgrxETVSFVRLIDFLTIEfqf--isgPEFk--dIIF 237 Saccharomyces c...
4A3V_A       153 ENDKLITAIEKALERLst----dELIRRRLFDn--nLPYLVSVKgrmETVSFVRLIDFLTIEfqf--isgPEFk--dIIF 222 Saccharomyces c...
CCH61670     146 TQISIVSQIEIFFSNN-------PIFKSYLLTqtesHICLQSARssnDPIIFARALTLLQSLftsf-nttNSFnldkKIF 217 Tetrapisispora ...
CCF57417     138 EDIKLISEVENIFQYHvltncgdDLVQDNLSF----LSMVKNSN---SPVLISRLLEFLTISme-----nSQFn---QIY 202 Kazachstania af...
CCE66108     147 TDLDIINKIENLFRSLss----dELVANKILVn--nKPVLLSIKkgaALINYSRMLELLSIFvvh--inqATFd--eELF 216 Tetrapisispora ...
XP_002421520 148 TPISVLNKIERLITVVn------GVEEIKLLEs--cIPILKEIResdNTVLLSRYLDLVSLLlr----ylPDFs--pQLY 213 Candida dublini...
EGW29882     139 TPIGVLNQIEKLTSLL-------TTTEFALLVtpsyLQLFSSFRhvdDTTILARYLDYLTLIlp----klKSVd--pTLY 205 Spathaspora pas...
XP_001385970 154 LDLGIVNQIELYVNSLiln-dvtNLLEEILTDtk-fVILYNSIRnseNTILLARLLDFILILlt----ykVDLpldpRLY 227 Pichia stipitis...
CCE81157     156 CGVEFESRCENLIKVLvas--rsPVASGMLLGre-fCDFYRTVKt-qRGSKVFTLMDYILLLlpagirsrTPIp--kDIY 229 Millerozyma far...
XP_458251    161 TTLNVVSQVELLISELvdl--ssTVVSTKLLSte-fRDLYEHARd--NEDKLVKFLDYILLLmpy--ileKQFdlpkNYY 233 Debaryomyces ha...
Feature 1                       ##   #                                                           
3VLD_A       238 CftkEEILKSVE--DILVFIELVNYYTKFLlei-----rnqDKYWA-LRHVKKILPVFAQLFEdt----enYPDVRa--- 302 Saccharomyces c...
4A3V_A       223 CftkEEILKSVE--DILVFIELVNYYTKFLlei-----rnqDKYWA-LRHVKKILPVFAQLFEdt----enYPDVRa--- 287 Saccharomyces c...
CCH61670     218 FfssNDLFKLLQs-DILCFINLTNYHTSLLdsi-----ltsTSHWS-LPDFQPIFNAYGSIYKdi----dtYPDIQs--- 283 Tetrapisispora ...
CCF57417     203 IfdiNYIYKFLNl-DIFLFINLLRFYTNILn----------REAWGqLDLFMPIMEESAKIFSkqd---emFPEIKs--- 265 Kazachstania af...
CCE66108     217 IitpEEIASLVDk-DILFFIQIINYYSKLLddlliddftreSKDWI-YQYLEPIFNVLGQYYKkr----deYVEIKl--- 287 Tetrapisispora ...
XP_002421520 214 SftkQEFLKYSD--DPLFLILLIQFYVKLVkle-----apvDLSLP-LSDILSLYDKFDFLVKn------eVVELVaqmt 279 Candida dublini...
EGW29882     206 Qf-tKREIDQIE--DPLFLILLAQFYGKLLeqpin--ieppLNDFI-SLYVDGKLDELVKGELinviakmsYLDKY---- 275 Spathaspora pas...
XP_001385970 228 TfsnVEIVTFKD--DPLFLILLVQFYVKLVqfsvleevspvIGNFV-NLYKDPTTDDFVKVEVid-----iLVKLSy--- 296 Pichia stipitis...
CCE81157     230 If--SKSECGLT--GALDEYLYVQYYVKLAalla---dtfdESIFAnSQLVLRELVSQYHISK--------QDEDRs--- 291 Millerozyma far...
XP_458251    234 V---LSYSEFYEndDVLQVVLFIQFYSKLIqrin----tfgNDTNI-IHNIKPCLKDLISYFKtr-----qNDDIVq--s 298 Debaryomyces ha...
Feature 1        #####  #                                                                        
3VLD_A       303 FSTNCLLQLFAEVSriee--deysLFKTXDKDslkig---------seaklITEWLELiNPQYLVKYHKDVVENYfh--- 368 Saccharomyces c...
4A3V_A       288 FSTNCLLQLFAEVSriee--deysLFKTMDKDslkig---------seaklITEWLELiNPQYLVKYHKDVVENYfh--- 353 Saccharomyces c...
CCH61670     284 FAKTHIFKLFAKISyln----dssIYHALDTSylkis---------picpdIVDFLSFtNPNYLFIHHNSLCTRFsi--- 347 Tetrapisispora ...
CCF57417     266 FALSYLFKFFAKISyls----ddsYFKTLDDKyfhit----------sndyIIDFLSFvNPLYLMKYYHDFIEGYvk--- 328 Kazachstania af...
CCE66108     288 FTLSYLFQIFRKVSywn----yenCFNLLDKHyleln---------yqnehIIDFLSFvNPKYLYEYHSEIIKEYad--- 351 Tetrapisispora ...
XP_002421520 280 FTQSYTDVLFKSQIfkth--nlleVFEKTENS-------------------DTRLLSKaNPQVIYELNNAIYPDVlahln 338 Candida dublini...
EGW29882     276 TSILEHSQLFKTHN----------LIKVFEHDq-----------------sDINLLSKaNPDVIVQLNYSVYRDVldnls 328 Spathaspora pas...
XP_001385970 297 ATNSLLIEYGLELAlnselfkshnLIKVYEYNe-----------------pDIKLLSNvNPDLIVHSSNVIYEDVlsnls 359 Pichia stipitis...
CCE81157     292 LYSHTIVELVSTLSsad-----vlPIQTFTRDliddyelfkpdnfdlesqaDFRLLRDiNPNLLPSEFYANTLQYvp--- 363 Millerozyma far...
XP_458251    299 FYANDIVDVLFHVSysk-----vpELLTFNEEvvgqyelfksynlflhldcDIKLLSTfNPRALPLEIIEDILQEis--- 370 Debaryomyces ha...
Feature 1                                                                                        
3VLD_A       369 --vSGYSIGXLRNLSADEECFNAIRn-kFSAeivlrLPYLEQXQVVETLTRYEYTSKFLLNEXPKVXGSLIgdgsagaII 445 Saccharomyces c...
4A3V_A       354 --vSGYSIGMLRNLSADEECFNAIRn-kFSAeivlrLPYLEQMQVVETLTRYEYTSKFLLNEMPKVMGSLIgdgsagaII 430 Saccharomyces c...
CCH61670     348 --fKPSNIPILRNLITLPQTFQLITp-nINSll--qLPYLEQMVLLQKMSQYHHCIVFLINNCPSIISNLLntn-ksnII 421 Tetrapisispora ...
CCF57417     329 --iKPSHLSILRNLISNITTFNLIQp-mLTTnnileMPFLEQLVLTEKISQFKYSSIYLVNLLPKLMSDILdt----nII 401 Kazachstania af...
CCE66108     352 --iKPSRLSILRNLVSNEKSFNLIKd-nFTAedilkMPYMEQMVLLERMSQYKYCVKYILHTMPTILGNLVnfn-glhII 427 Tetrapisispora ...
XP_002421520 339 lftNNLYFPILLNFMGSTTIFYQLKl-hLNNeklsqLPMDKLFKLLLEMSTHNHSKEHLFNNLPTIMATNLlet--edLR 415 Candida dublini...
EGW29882     329 lfnDNLYLPILLNFIKSPVIFGLLSs-qFNYlkfsgMSMDKLYLILLSMSEKGHTKEYLFNNLPNVITQYLle---seIS 404 Spathaspora pas...
XP_001385970 360 llnNKQYFPILLNFIGSTDVFPRLEqdyFTTkl-khLPADKLYVILLEFSKFSHSRKFLLSNATLTNDYLLdnd-nltFV 437 Pichia stipitis...
CCE81157     364 -llSKKYFDITINLIASEEMFDKMAp-vLTSkvitrLPFDFLHALIFRLTCFPYGIHHLIHQLPTIVSNHLvss--tnVT 439 Millerozyma far...
XP_458251    371 -ifNQKYFSILLNCIGSENVFNKLIp-rLTTsvigkLSFDMLYSLLLRMSEFEYSRKHLINGMPNIVSDYLanp--pnVS 446 Debaryomyces ha...
Feature 1                                                   
3VLD_A       446 DLETVHYRNSALRNLLdkg---eekLSVWYEPLLREYSKAVNG 485 Saccharomyces cerevisiae S288c
4A3V_A       431 DLETVHYRNSALRNLLdkg---eekLSVWYEPLLREYSKAVNG 470 Saccharomyces cerevisiae W303
CCH61670     422 ESETVELRNEVLENFLhfd---ksiLDVWFEPLKKEYNSTPTY 461 Tetrapisispora blattae CBS 6284
CCF57417     402 EPECLQFKENIVDNLLnvls--keeLNIWYTPLNDEYLKITHN 442 Kazachstania africana CBS 2517
CCE66108     428 ETETVELREQTIDNLIhfd---vdlLGTWYAPLVDELNKIKYH 467 Tetrapisispora phaffii CBS 4417
XP_002421520 416 NNELWNLKLEILQNLLndds--vpgFEFWHQELTRNYELMAFG 456 Candida dubliniensis CD36
EGW29882     405 NNQLWKLKLEIFTNLLsdpe--vvgYAYWHDELNRVYELMKYG 445 Spathaspora passalidarum NRRL Y-27907
XP_001385970 438 NNELWHTKLQVLENLVnatdsdspeLAHWKPYLQDSFNLMRHG 480 Pichia stipitis CBS 6054
CCE81157     440 ETNILKLKTDSLYNLLnsd----edLEMFYDGLRTAYAEITGK 478 Millerozyma farinosa CBS 7064
XP_458251    447 ESEIWNLKKDTLQNLLfsn----tdLNVWHDPISKNFSLMCNG 485 Debaryomyces hansenii CBS767

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