3S7R,3S7R


Conserved Protein Domain Family
RRM1_hnRNPAB

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cd12757: RRM1_hnRNPAB 
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RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
This subgroup corresponds to the RRM1 of hnRNP A/B, also termed APOBEC1-binding protein 1 (ABBP-1), which is an RNA unwinding protein with a high affinity for G- followed by U-rich regions. hnRNP A/B has also been identified as an APOBEC1-binding protein that interacts with apolipoprotein B (apoB) mRNA transcripts around the editing site and thus plays an important role in apoB mRNA editing. hnRNP A/B contains two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), followed by a long C-terminal glycine-rich domain that contains a potential ATP/GTP binding loop.
Statistics
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PSSM-Id: 410151
Aligned: 6 rows
Threshold Bit Score: 150.893
Created: 20-Sep-2011
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3S7R_B         8 EEDAGKXFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKXDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKA 87  human
NP_001080489  60 LTEGVKMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEHKEHRLDGRLIDPKKA 139 African clawed ...
NP_997752     65 EEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQKEHRLDGRQIDPKKA 144 zebrafish
NP_990659     86 EEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLIDPKKA 165 chicken
3S7R_A         8 EEDAGKXFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKXDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKA 87  human
XP_005989394  52 EEDAGKMFVGGLSWDTSKKDLKDHFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDPASVDKVLEQKEHRLDGRVIDPKRA 131 coelacanth
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