Conserved Protein Domain Family
RRM1_RBM5

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cd12752: RRM1_RBM5 
RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 5 (RBM5)
This subgroup corresponds to the RRM1 of RBM5, also termed protein G15, or putative tumor suppressor LUCA15, or renal carcinoma antigen NY-REN-9, a known modulator of apoptosis. It may also act as a tumor suppressor or an RNA splicing factor. RBM5 shows high sequence similarity to RNA-binding protein 6 (RBM6 or NY-LU-12 or g16 or DEF-3). Both, RBM5 and RBM6, specifically bind poly(G) RNA. They contain two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), two C2H2-type zinc fingers, a nuclear localization signal, and a G-patch/D111 domain.
Statistics
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PSSM-Id: 410146
Aligned: 6 rows
Threshold Bit Score: 179.75
Created: 17-Jan-2012
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P52756        93 DERESKTIMLRGLPIt-ITESDIREMMESFEGPqPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHI 171 human
A0JMV4        97 DEKESKTIMLRGLPIn-INENDIRELVESFEGPqPADVRLMKRKTGLSRGFAFVEFYHLQDSTSWMEANQKKLVIQGKTI 175 African clawed ...
NP_001012798 191 DEKESKTIMLRGLPIt-VTENDIRELIESFESPqPADVRLMKRKTGVSRGFAFVEFYHFQDATSWMEANQKKLVIQGKQI 269 chicken
Q6DDU9        97 DEKESKTIMLRGLPIn-INENDIRELVESFEGPqPADVRLMKRKTGLSRGFAFVEFYHLQDATRWMEANQKKLVIQGKTI 175 African clawed ...
XP_014344031  95 DEKESKTIMLRGLPLnvTENDIRVEILESFEGPqPADVRLMKRKTGVSRGFAFVEFYHLQDATGWMEANQKQLIIQGKTV 174 coelacanth
NP_001093608 110 DEKESKTIMLRGLPMn-TSEADIRAAIDLLEGPkPMDVRLMKKRTGISRGFAFVEFYHLQAATRWMETNQKLLCVQGKPV 188 zebrafish
P52756       172 AMHYSNPR 179 human
A0JMV4       176 AMHYSNPR 183 African clawed frog
NP_001012798 270 AMHYSNPR 277 chicken
Q6DDU9       176 AMHYSNPR 183 African clawed frog
XP_014344031 175 AMHYSNPR 182 coelacanth
NP_001093608 189 VVHYSNNR 196 zebrafish
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