2RVJ


Conserved Protein Domain Family
RRM3_ESRP1_ESRP2

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cd12742: RRM3_ESRP1_ESRP2 
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RNA recognition motif 3 (RRM3) found in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
This subgroup corresponds to the RRM3 of ESRP1 (also termed RBM35A) and ESRP2 (also termed RBM35B). These are epithelial-specific RNA binding proteins that promote splicing of the epithelial variant of the fibroblast growth factor receptor 2 (FGFR2), ENAH (also termed hMena), CD44 and CTNND1 (also termed p120-Catenin) transcripts. They are highly conserved paralogs and specifically bind to GU-rich binding site. ESRP1 and ESRP2 contain three RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
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PSSM-Id: 410138
Aligned: 12 rows
Threshold Bit Score: 170.367
Created: 21-Sep-2011
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2RVJ_A         7 RDCIRLRGLPYaATIEDILDFLGEfatDIRTHGVHMVLNhQGRPSGDAFIQMKSADRAFMAAQKCHKKnMKDRYVEVFQC 86  human
Q7ZY29       445 RDCIRLRGLPYaATIEDILEFLGEfsaDIRTHGVHMVLNhQGRPSGDSFIQMKSADRAYLAAQKCHKKtMKDRYVEVFQC 524 African clawed ...
A1L1G1       449 RDCVRLRGLPYdASIQDILVFLGEygaDIKTHGVHMVLNhQGRPSGEAFIQMRSAERAFLAAQRCHKRsMKERYVEVFAC 528 zebrafish
Q5ZLR4       446 RDCVRLRGLPYtAGIDDILDFMGDataDIKPHGVHMVLNqQGRPSGDAFIQMKSADKAFMVAQKCHKKmMKDRYVEVFQC 525 chicken
XP_002605005 433 RDCVRMRGLPYqATHDDVLAFLGEyavYVRDHGIHMVLNsSGKPSGDCFIQMYSPEAARQAAEKCHRQyMGDRYIEVFQC 512 Florida lancelet
XP_002736133 442 RDCIRMRGLPFsASVEDIMKFLGEfahYIRPHGVHMVLNqQGRPSGDAFIQMISAEKALHAAQQCHRKhMGERYIEVFQC 521 Saccoglossus ko...
Q9H6T0       474 RDCVRLRGLPYtATIEDILSFLGEaaaDIRPHGVHMVLNqQGRPSGDAFIQMTSAERALAAAQRCHKKvMKERYVEVVPC 553 human
Q7ZVR8       449 RDCIRLRGLPYtAAIEDILEFMGEhtiDIKPHGVHMVLNqQGRPSGDAFIQMKSADRAFMVAQKCHKKmMKDRYVEVFQC 528 zebrafish
XP_418338    444 RDCIRLRGLPYaATIEDILEFLGEfstDIRTHGVHMVLNhQGRPSGDAFIQMKSADRAFLAAQRCHKKtMKDRYVEVFQC 523 chicken
Q6NXG1       444 RDCIRLRGLPYaATIEDILDFLGEfatDIRTHGVHMVLNhQGRPSGDAFIQMKSADRAFMAAQKCHKKnMKDRYVEVFQC 523 human
XP_007887689 443 RDCIRLRGLPYtATIEDILEFMGEftvDIKPHGVHMVLNqQGRPSGDAFIQMKSADRAFLVAQKCHKKtMKDRYVEVFQC 522 elephant shark
XP_006003504 401 RDCIRLRGLPYaATIEDILEFLGEfsaDIRPHGVHMVLNhQGRPSGDAFIQMKSADRAFLTAQKCHKKvMKDRYVEVFPC 480 coelacanth
2RVJ_A        87 S 87  human
Q7ZY29       525 S 525 African clawed frog
A1L1G1       529 S 529 zebrafish
Q5ZLR4       526 S 526 chicken
XP_002605005 513 S 513 Florida lancelet
XP_002736133 522 S 522 Saccoglossus kowalevskii
Q9H6T0       554 S 554 human
Q7ZVR8       529 S 529 zebrafish
XP_418338    524 S 524 chicken
Q6NXG1       524 S 524 human
XP_007887689 523 S 523 elephant shark
XP_006003504 481 S 481 coelacanth
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