Conserved Protein Domain Family
RRM1_ESRP2

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cd12737: RRM1_ESRP2 
RNA recognition motif 1 (RRM1) found in epithelial splicing regulatory protein 2 (ESRP2) and similar proteins
This subgroup corresponds to the RRM1 of ESRP2, also termed RNA-binding motif protein 35B (RBM35B), which has been identified as an epithelial cell type-specific regulator of fibroblast growth factor receptor 2 (FGFR2) splicing. It is required for expression of epithelial FGFR2-IIIb and the regulation of CD44, CTNND1 (also termed p120-Catenin) and ENAH (also termed hMena) splicing. It enhances epithelial-specific exons of CD44 and ENAH, silences mesenchymal exons of CTNND1, or both within FGFR2. ESRP2 contains three RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
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PSSM-Id: 410135
Aligned: 5 rows
Threshold Bit Score: 180.199
Created: 21-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9H6T0       258 VVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGvRYIEVYKATGEEF 337 human
Q5ZLR4       227 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGsRYIEVYKATGEEF 306 chicken
Q7ZVR8       225 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFINSEHRDMALDRHKHHMGsRYIEVYKATGEEF 304 zebrafish
XP_007887689 225 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFINAEQRDLALERHKHHMGsRYIEVYKATGEEF 304 elephant shark
XP_005992861 227 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFDGSDQRDLALERHKHHMGsRYIEVYKATGEEF 306 coelacanth
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