1UFW


Conserved Protein Domain Family
RRM_SYNJ2

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cd12720: RRM_SYNJ2 
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RNA recognition motif (RRM) found in synaptojanin-2 and similar proteins
This subgroup corresponds to the RRM of synaptojanin-2, also termed synaptic inositol-1,4,5-trisphosphate 5-phosphatase 2, an ubiquitously expressed central regulatory enzyme in the phosphoinositide-signaling cascade. As a novel Rac1 effector regulating the early step of clathrin-mediated endocytosis, synaptojanin-2 acts as a polyphosphoinositide phosphatase directly and specifically interacting with Rac1 in a GTP-dependent manner. It mediates the inhibitory effect of Rac1 on endocytosis and plays an important role in the Rac1-mediated control of cell growth. Synaptojanin-2 shows high sequence homology to the N-terminal Sac1p homology domain, the central inositol 5-phosphatase domain, the putative RNA recognition motif (RRM) of synaptojanin-1, but differs in the proline-rich region.
Statistics
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PSSM-Id: 410119
Aligned: 5 rows
Threshold Bit Score: 147.622
Created: 31-Jan-2012
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1UFW_A         15 DATVVVNLQSptleekneFPEDLRTELMQTLGsYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRAVKISGP 92   human
XP_003640964  888 DATVVVNLLSpvpeekndFPEDLRTELMQMFEdYGTVVLVRISGGQMLVTFADSKSALRVMDIDGIKVRGRTVKIRPK 965  chicken
NP_001135511  891 DATVEVRILFptaeekadFPEDISTELVKTFQtYGNVILVRLIRGQMIVTFEDSRTALNVLDLDGLKVNGKTIKIRPK 968  western clawed ...
XP_006007959  890 DATVVVQLHSptneerdeFPEELSNEVVSCFQnYGNVILIRFNHGQMLVTFEDSRSALRVLDLDGIKVNGRAVKMKPK 967  coelacanth
XP_007896486  879 DATVVVCVKTpsleeredFPEDISCELIHCFRsYGTVLLLRFDRGQMLVTFQDSCVVLKVLELDGTKVNGRAVSIKPL 956  elephant shark
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