Conserved Protein Domain Family
RRM_ETP1

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cd12717: RRM_ETP1 
RNA recognition motif (RRM) found in yeast RING finger protein ETP1 and similar proteins
This subgroup corresponds to the RRM of ETP1, also termed BRAP2 homolog, or ethanol tolerance protein 1, the yeast homolog of BRCA1-associated protein (BRAP2) found in vertebrates. It may be involved in ethanol and salt-induced transcriptional activation of the NHA1 promoter and heat shock protein genes (HSP12 and HSP26), and participate in ethanol-induced turnover of the low-affinity hexose transporter Hxt3p. ETP1 contains an N-terminal RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain), followed by a C3HC4-type ring finger domain and a UBP-type zinc finger.
Statistics
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PSSM-Id: 410116
Aligned: 10 rows
Threshold Bit Score: 123.213
Created: 15-May-2012
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P38748       114 MICILFVPtyFTVHDLLHFYIgddivnkqVSNFRILRNqqkgmGFNFTVLIKFRnalDAKNFKEeFNGKSFSRMDPEt-C 192 Saccharomyces c...
BAE58266     119 TLCILAVPsyMSPSDFLGFVGeas--mddVSHFRMIRTa---rANRYMVLLKFRsgkKAKEWQKeWNGKVFNSMEPEt-C 192 Aspergillus ory...
NP_986587     95 MCSILFVPgyLNCGELLHWFLgptv-lkqVSHFRLVRLhd--rQGEYMVLIKFRkpqDAKRFQSeYNGKRFNSLDGTt-C 170 Ashbya gossypii...
EGN96579     148 VLAVLAVPswMTPSDFLGFVApaa---egMAHLRIIRDs---vPNRSLVIMNFRqaqEATEFIEaYNGKLFNSMDPEt-C 220 Serpula lacryma...
O13747        88 ILAILAIPlyMSPSDVLGFLGekh--cksIQHIRLLKTk---dPNRIMALLKFKdqaSVIRFYTeFNGKAFSQIDPEt-C 161 Schizosaccharom...
XP_023881075 258 TLCILAVPswMMPSDLLGFVGdqa--redISHFRLIRTg---rANKYMVLMKFRhakKAREWQKaYNGRLFSAAEPEn-C 331 Quercus suber
XP_018224519 214 IVAILAVPsyMSTYDFLGFVGed-----vKNQLTIRRTs---aPNRYMVLLKFRqfkSAKAFYKaFNGKSFNSTEPEk-C 284 Pneumocystis ca...
POY73401     276 TVGLISVPgvLNAAALLAFIApal---edIEQVRMLRDs---tPNRSLVLLRFRdapSASEFRRmYNGKPYHDSKESevC 349 Rhodotorula tai...
XP_456226     93 MLAILFIPnyLTINRLLGWFIgeet-tnqVTHLQLIKMnk--eKGRFMLLMKFKeqsLAKEFQKlFDGKKFNEIDPEt-C 168 Kluyveromyces l...
XP_022627094 110 TVAILFVPsyLTARETLFSFLgdtv-ldqASHIRIIRS-----SAEFLVLIKFRdpeCAQEFIKeFDGKKFNAIDPSt-C 182 Lachancea lanza...
P38748       193 HVISVKEIV 201 Saccharomyces cerevisiae S288c
BAE58266     193 HVVFVKSVE 201 Aspergillus oryzae RIB40
NP_986587    171 HVVYVKEII 179 Ashbya gossypii ATCC 10895
EGN96579     221 HVVRVLSVQ 229 Serpula lacrymans var. lacrymans S7.3
O13747       162 HVLHIDKVN 170 Schizosaccharomyces pombe 972h-
XP_023881075 332 HVVFVKSVE 340 Quercus suber
XP_018224519 285 HTVFIKQIL 293 Pneumocystis carinii B80
POY73401     350 HVVPISSIK 358 Rhodotorula taiwanensis
XP_456226    169 HVVAIKELI 177 Kluyveromyces lactis
XP_022627094 183 HVAQIREIT 191 Lachancea lanzarotensis
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