Conserved Protein Domain Family
RRM3_Nop4p

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cd12676: RRM3_Nop4p 
RNA recognition motif 3 (RRM3) found in yeast nucleolar protein 4 (Nop4p) and similar proteins
This subgroup corresponds to the RRM3 of Nop4p (also known as Nop77p), encoded by YPL043W from Saccharomyces cerevisiae. It is an essential nucleolar protein involved in processing and maturation of 27S pre-rRNA and biogenesis of 60S ribosomal subunits. Nop4p has four RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
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PSSM-Id: 410077
Aligned: 11 rows
Threshold Bit Score: 125.231
Created: 7-Feb-2012
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P37838        289 DFSVFVRNVPYDaTEESLAPHFSkFGSVKYALPVIDKSTgLAKGTAFVAFKDqYTYNECIKNAPaagstsll-------- 360  Saccharomyces...
CBQ67927      571 GTTLFVRNLPYQaTEEELRNLFRtFGPLRYAKITMDKTTnRSKGTGFVCFWQsSSADAALAQAKiieresgvsgsstass 650  Sporisorium r...
EAA33697      340 SLTLFIRNLPYTtTDEQLKAHFTqFGGIRYARVVKDKATdRPAGTGFVCFFNeEEMKACLKGAPrhqptttlvkhs---- 415  Neurospora cr...
XP_023897287  313 SNTLFVRNLPFTcTDEDLEDHFAtFGSTRYARVVMDYETgRSKGTGFICFYNqDDANACIRGAPrkpvlsqaekakesqv 392  Quercus suber
CCJ28986      860 ERTLFVKNLSFQtTDNELFSHFCqFGRLKYARVVMDAFTgRSKGTAFVCFHHkMDMENCLNVYRdltqqsalsvnkks-- 937  Pneumocystis ...
PVU94080      328 ETTFFVKNVSFEtQEDDLYSLFSkFGKVKYCRIVLDRDSkRSKGTAFVCFWDkEIFDECYSSNLeaqksmenisysldnq 407  Smittium simulii
O74400        276 EDTVFVRNLLFEcTEQELYNHFRqFGPLAYAKLVKDPATdRSLGRGFIKFRYeKDCQNCLEMASqlptqepteaekrflp 355  Schizosacchar...
EFN67751      395 GRTVFLKNVPFSvKNDELKSFMEqFGPIYYALVCIDPLTeYSKGTAFVKFRNiEDAEKCLSAGTe--------------- 459  Camponotus fl...
ACH95270      232 GCTVFIKNVPFDaEDADLRKACRkFGLVSYAIINRQAVSgHSKGTAFVKFKAkESADLCLQAGTe--------------- 296  fruit fly
CCD59892        8 GRTIFIRNLSFDvEEDALYKFFSqFGPLEFAKVVKDPATqHSRGTAFVKFVNvEDASNVLQQSDkpen------------ 75   Schistosoma m...
XP_783689     194 GKTLFIRNVPYDsTDDDIRDLFApFGELEFARVVVDPMTeHSRGTAFVKFKRkEDADGCLHEGDa--------------- 258  purple sea ur...
P37838        361 --------------------igddvmpeYVYEGRVLSITPTLVREDA 387  Saccharomyces cerevisiae S288c
CBQ67927      651 svanq--knpfampsvltadpaapltasLNLHGRVLNVIPAVARDEA 695  Sporisorium reilianum SRZ2
EAA33697      416 ----------------ilqdetvdpegkYTLDGRILQVAHAVSKDEA 446  Neurospora crassa OR74A
XP_023897287  393 -------------hnsllqndatdpsgqYTLDGRVLQVSRAVNKQEA 426  Quercus suber
CCJ28986      938 --------------tvlqnqilddniekFTLDGHLVSVFPALNKEDI 970  Pneumocystis jirovecii
PVU94080      408 akdssenrlasnsvlvmetpktlpivamFTIDGRFLQLNPAISREDA 454  Smittium simulii
O74400        356 ------------svlvdegidtdsvssrFLLHGRLLKVTSAVTRKEA 390  Schizosaccharomyces pombe 972h-
EFN67751      460 ----------------------------LRLRDQIIEAHRALHKNEV 478  Camponotus floridanus
ACH95270      297 ----------------------------FKLMDEVLDPHPALSREEM 315  fruit fly
CCD59892       76 -------------------------ahqFSLENRTLNITIAVSRTEA 97   Schistosoma mansoni
XP_783689     259 ----------------------------VRLNGRLLALSPAISRAEA 277  purple sea urchin
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