Conserved Protein Domain Family
RRM3_HuC

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cd12655: RRM3_HuC 
RNA recognition motif 3 (RRM3) found in vertebrate Hu-antigen C (HuC)
This subgroup corresponds to the RRM3 of HuC, also termed ELAV-like protein 3 (ELAV-3), or paraneoplastic cerebellar degeneration-associated antigen, or paraneoplastic limbic encephalitis antigen 21 (PLE21), one of the neuronal members of the Hu family. The neuronal Hu proteins play important roles in neuronal differentiation, plasticity and memory. Like other Hu proteins, HuC contains three RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains). RRM1 and RRM2 may cooperate in binding to an AU-rich RNA element (ARE). The AU-rich element binding of HuC can be inhibited by flavonoids. RRM3 may help to maintain the stability of the RNA-protein complex, and might also bind to poly(A) tails or be involved in protein-protein interactions.
Statistics
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PSSM-Id: 410057
Aligned: 5 rows
Threshold Bit Score: 177.556
Created: 23-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q14576       283 GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFtTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTS 362 human
Q91584       264 GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFtTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTS 343 African clawed ...
NP_571524    261 GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFtTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTS 340 zebrafish
XP_014342799 286 GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFtTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTS 365 coelacanth
NP_990163    281 GWCIFVYNLAPEADESVFWQFFGPFGAVTNVKIIRDFaTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGERVLQVSFKTS 360 chicken
Q14576       363 KQHKA 367 human
Q91584       344 KQHKA 348 African clawed frog
NP_571524    341 KQHKA 345 zebrafish
XP_014342799 366 KQHKA 370 coelacanth
NP_990163    361 KQHKA 365 chicken
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