1X4G


Conserved Protein Domain Family
RRM3_TIAR

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cd12620: RRM3_TIAR 
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RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
This subgroup corresponds to the RRM3 of nucleolysin TIAR, also termed TIA-1-related protein, a cytotoxic granule-associated RNA-binding protein that shows high sequence similarity with 40-kDa isoform of T-cell-restricted intracellular antigen-1 (p40-TIA-1). TIAR is mainly localized in the nucleus of hematopoietic and nonhematopoietic cells. It is translocated from the nucleus to the cytoplasm in response to exogenous triggers of apoptosis. TIAR possesses nucleolytic activity against cytolytic lymphocyte (CTL) target cells. It can trigger DNA fragmentation in permeabilized thymocytes, and thus may function as an effector responsible for inducing apoptosis. TIAR is composed of three N-terminal highly homologous RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), and a glutamine-rich C-terminal auxiliary domain containing a lysosome-targeting motif. It interacts with RNAs containing short stretches of uridylates and its RRM2 can mediate the specific binding to uridylate-rich RNAs.
Statistics
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PSSM-Id: 241064
Aligned: 6 rows
Threshold Bit Score: 149.015
Created: 21-Sep-2011
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1X4G_A        26 CTVYCGGIAsglTDQLMRQTFSpfGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIeGHVVKCYWGKE 98  human
CAC95017     221 CTVYCGGIGsglTEQLMRQTFGvfGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIeGHVVKCYWGKE 293 African clawed frog
NP_957426    204 CTVYCGGIQsglTEHLMRQTFSpfGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIeGHVVKCYWGKE 276 zebrafish
AAO49721     221 CTVYCGGIAsglTDQLMRQTFSpfGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIeGHVVKCYWGKE 293 chicken
XP_007903834 204 CTVYCGGIAsglTEQLMRQTFSpfGQILEIRVFPEKGYSFVRFATHDSAAHAIVSVNGTTIeGHVVKCYWGKE 276 elephant shark
XP_005999272 223 CTVYCGGIAsglTEQLMRQTFSlfGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIeGHVVKCYWGKE 295 coelacanth
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