2DH7


Conserved Protein Domain Family
RRM2_TIAR

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cd12617: RRM2_TIAR 
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RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins
This subgroup corresponds to the RRM2 of nucleolysin TIAR, also termed TIA-1-related protein, a cytotoxic granule-associated RNA-binding protein that shows high sequence similarity with 40-kDa isoform of T-cell-restricted intracellular antigen-1 (p40-TIA-1). TIAR is mainly localized in the nucleus of hematopoietic and nonhematopoietic cells. It is translocated from the nucleus to the cytoplasm in response to exogenous triggers of apoptosis. TIAR possesses nucleolytic activity against cytolytic lymphocyte (CTL) target cells. It can trigger DNA fragmentation in permeabilized thymocytes, and thus may function as an effector responsible for inducing apoptosis. TIAR is composed of three N-terminal, highly homologous RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), and a glutamine-rich C-terminal auxiliary domain containing a lysosome-targeting motif. It interacts with RNAs containing short stretches of uridylates and its RRM2 can mediate the specific binding to uridylate-rich RNAs.
Statistics
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PSSM-Id: 410029
Aligned: 6 rows
Threshold Bit Score: 162.854
Created: 16-Sep-2011
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DH7_A        15 HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMaTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 94  human
AAH45086     150 HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMaTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 229 African clawed ...
NP_957426     95 HFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMtTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 174 zebrafish
AAO49721     112 HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMaTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 191 chicken
XP_007903834  95 HFHVFVGDLSPEITTEDLKSAFAPFGRISDARVVKDLsTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 174 elephant shark
XP_005999272 114 HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMaTGKSRGYGFVSFYNKLDAENAIMHMGGQWLGARPIRTNWATR 193 coelacanth
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