5HO4,5EN1


Conserved Protein Domain Family
RRM2_hnRNPA2B1

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cd12581: RRM2_hnRNPA2B1 
RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP A2/B1) and similar proteins
This subgroup corresponds to the RRM2 of hnRNP A2/B1, an RNA trafficking response element-binding protein that interacts with the hnRNP A2 response element (A2RE). Many mRNAs, such as myelin basic protein (MBP), myelin-associated oligodendrocytic basic protein (MOBP), carboxyanhydrase II (CAII), microtubule-associated protein tau, and amyloid precursor protein (APP) are trafficked by hnRNP A2/B1. hnRNP A2/B1 also functions as a splicing factor that regulates alternative splicing of the tumor suppressors, such as BIN1, WWOX, the antiapoptotic proteins c-FLIP and caspase-9B, the insulin receptor (IR), and the RON proto-oncogene among others. Overexpression of hnRNP A2/B1 has been described in many cancers. It functions as a nuclear matrix protein involving in RNA synthesis and the regulation of cellular migration through alternatively splicing pre-mRNA. It may play a role in tumor cell differentiation. hnRNP A2/B1 contains two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), followed by a long glycine-rich region at the C-terminus.
Statistics
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PSSM-Id: 409995
Aligned: 7 rows
Threshold Bit Score: 163.23
Created: 20-Sep-2011
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5HO4_A        98 KKLFVGGIKEDtEEHHLRDYFEeYGKIDTIEIITDRqsGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 177 human
P51989       100 KKLFVGGIKEDtEEHHLREYFEeYGKIDSIEIITDKqsGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179 African clawed ...
NP_001026156 108 KKLFVGGIKEDtEEHHLRDYFEeYGKIDTIEIITDRqsGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 187 chicken
P22626       112 KKLFVGGIKEDtEEHHLRDYFEeYGKIDTIEIITDRqsGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 191 human
5EN1_A       101 KKLFVGGIKEDtEEHHLRDYFEeYGKIDTIEIITDRqsGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 180 human
XP_014342189 100 KKLFVGGIKEDtEEHHLRDYFEsYGKIENIELIKDKqtGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQ 179 coelacanth
XP_007898703 101 KKLFVGGIKDDtDEHHLREYFQtFGNIETIEVITDRqsGKKRGFAFVTFDDHDPVDKVVLQKYHYVNGHNAEVRKALSRQ 180 elephant shark
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