2LKZ,2M2B


Conserved Protein Domain Family
RRM2_RBM5_like

?
cd12562: RRM2_RBM5_like 
RNA recognition motif 2 (RRM2) found in RNA-binding protein 5 (RBM5) and similar proteins
This subgroup corresponds to the RRM2 of RNA-binding protein 5 (RBM5 or LUCA15 or H37), RNA-binding protein 10 (RBM10 or S1-1) and similar proteins. RBM5 is a known modulator of apoptosis. It may also act as a tumor suppressor or an RNA splicing factor; it specifically binds poly(G) RNA. RBM10, a paralog of RBM5, may play an important role in mRNA generation, processing and degradation in several cell types. The rat homolog of human RBM10 is protein S1-1, a hypothetical RNA binding protein with poly(G) and poly(U) binding capabilities. Both, RBM5 and RBM10, contain two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), two C2H2-type zinc fingers, and a G-patch/D111 domain.
Statistics
?
PSSM-Id: 409978
Aligned: 3 rows
Threshold Bit Score: 153.95
Created: 27-Sep-2011
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2LKZ_A         8 HMDTIILRNIAphTVVDSIMTALSPYaslavNNIRLIKDKqtQQNRGFAFVQLSsaMDASQLLQILqslhppLKIDGKTI 87   human
2M2B_A        22 ANDTIILRNLNphSTMDSILGALAPYavlssSNVRVIKDKqtQLNRGFAFIQLSt-IEAAQLLQILqalhppLTIDGKTI 100  human
XP_007888460 322 TNDTIILRNIGprTSVESILIALAPYamlstANVRLIKDKqtQLNRGFAFVQLDspFEASHLIQILlslqppLNIDGRTI 401  elephant shark
2LKZ_A        88 GVDFAK 93   human
2M2B_A       101 NVEFAK 106  human
XP_007888460 402 NVDFAK 407  elephant shark
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap