Conserved Protein Domain Family
RRM1_RBM47

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cd12485: RRM1_RBM47 
RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 47 (RBM47)
This subgroup corresponds to the RRM1 of RBM47, a putative RNA-binding protein that shows high sequence homology with heterogeneous nuclear ribonucleoprotein R (hnRNP R) and heterogeneous nuclear ribonucleoprotein Q (hnRNP Q). Its biological function remains unclear. Like hnRNP R and hnRNP Q, RBM47 contains two well-defined and one degenerated RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
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PSSM-Id: 240929
Aligned: 6 rows
Threshold Bit Score: 170.146
Created: 19-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A0AV96        70 GCEVFVGKIPRDVYEDELVPVFEAvGRIYELRLMMDFdGKNRGYAFVMYCHKHEAKRAVRELNnYEIRPGRLLGVCCS 147 human
NP_001108158  81 GCEIFVGKIPRDVYEDELVPVFESvGRIYEMRLMMDFdGKNRGYAFVMYTQKHEAKRAVRELNnFEIRPGRLLGVCSS 158 zebrafish
NP_001135499  70 GCEVFVGKIPRDVYEDELVPVFESaGRIFEMRLMMDFdGKNRGYAFVMFTKKHEAKQAVRELNnYEIRPGRLLGVCCS 147 western clawed frog
KFW83873      70 GCEVFVGKIPRDVYEDELVPVFESvGRIYEMRLMMDFdGKNRGYAFVMYTQKHEAKRAVRELNnYEIRPGRLLGVCCS 147 golden-collared m...
XP_006001542  70 GCEVFVGKIPRDVYEDELVPVFESvGRIYEMRLMMDFdGKNRGYAFVMYTQKHEAKRAVREINnYEIRPGRLLGVCSS 147 coelacanth
XP_007887342  93 GCEVFVGKIPRDVYEDELVPVFESvGRIYEMRLMMDFdGKNRGYAFVMFTAKHEAKRAVRELNnYEIRPGRLLGVCSS 170 elephant shark
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