Conserved Protein Domain Family
RRM1_RBM46

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cd12484: RRM1_RBM46 
RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 46 (RBM46)
This subgroup corresponds to the RRM1 of RBM46, also termed cancer/testis antigen 68 (CT68), a putative RNA-binding protein that shows high sequence homology with heterogeneous nuclear ribonucleoprotein R (hnRNP R) and heterogeneous nuclear ribonucleoprotein Q (hnRNP Q). Its biological function remains unclear. Like hnRNP R and hnRNP Q, RBM46 contains two well-defined and one degenerated RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
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PSSM-Id: 409911
Aligned: 6 rows
Threshold Bit Score: 165.835
Created: 19-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8TBY0        60 GCEVFVGKIPRDMYEDELVPVFERaGKIYEFRLMMEFsGENRGYAFVMYTTKEEAQLAIRILNnYEIRPGKFIGVCVS 137 human
Q0P4R6        60 GCEVFVGKIPRDMYEDKLVPLFARaGKIYEFRLMMEFsGENRGYAFVMYTNKEEALLAIRMLNnYEICQGKFIGVCVS 137 western clawed frog
Q08BH5        44 GREVFVGKIPRDMYEDELVPVFEQaGHIYEFRLMMEFsGENRGYAFVMYTTREKAQRAIQLLDnYEIRPGKFIGVCVS 121 zebrafish
XP_420372     60 GCEVFVGKIPRNIYEDELVPLFERaGKIYELRLMMEFsGENRGFAFVMYTTKEDAQLAIKILNnYEIRPGRFIGVCIS 137 chicken
XP_014339424  40 GCEVFVGKIPRDMYEDELVPVFERaGKIYEFRLMMEFsGENRGYAFVMYTTKEEAQLAIKMLNnYEIRPGKFIGVCVS 117 coelacanth
XP_007904752  60 GCEVFVGKIPRDMYEDELVPVFQRaGKIYEFRLMMEFsGENRGYAFVMYTTREEAQNAIKMLNnYEIRPGKFIGVCVS 137 elephant shark
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